BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF06RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig189 1431 0.0 >3x_Contig189 Length = 1476 Score = 1431 bits (722), Expect = 0.0 Identities = 771/784 (98%), Gaps = 3/784 (0%) Strand = Plus / Plus Query: 50 ctggcctatacgaattcatactcgaaagattctctggtaagagtaggtatcaagagtgta 109 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 694 ctggcctatacgaattcata-tcgaaagattctctggtaagagtaggtatcaagagtgta 752 Query: 110 aaagatccaaaggacgatccaaagatcaattactttgaagaactaaagaagaaacctaca 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 aaagatccaaaggacgatccaaagatcaattactttgaagaactaaagaagaaacctaca 812 Query: 170 aaggaatatattacaaagttgaagtcccagcaaccggaatatagaatgttcagggctcgt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 aaggaatatattacaaagttgaagtcccagcaaccggaatatagaatgttcagggctcgt 872 Query: 230 tgaaatagatcgatgtgtgtatataaacgactcttttacgtataacttttgtgagagcta 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tgaaatagatcgatgtgtgtatataaacgactcttttacgtataacttttgtgagagcta 932 Query: 290 atcccactatctgtaaataggctatcaaagattcaagatttaaagtcccaaatgagtaaa 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 atcccactatctgtaaataggctatcaaagattcaagatttaaagtcccaaatgagtaaa 992 Query: 350 gtttggttgtttgtcaaactacaaaagttaatacttacgtatatttatctatttcacaca 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gtttggttgtttgtcaaactacaaaagttaatacttacgtatatttatctatttcacaca 1052 Query: 410 ttgtccttgcaatgaacccttctaaatggtagattgctttgtttccaaggttgagacggt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ttgtccttgcaatgaacccttctaaatggtagattgctttgtttccaaggttgagacggt 1112 Query: 470 gatcaaaagtgcatgcagtatcgataattgccaacttcaacggatctgactgggcatctg 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gatcaaaagtgcatgcagtatcgataattgccaacttcaacggatctgactgggcatctg 1172 Query: 530 aaagcaattgcgtcgttaattcatggactatggttttggcaggaatacaatgggctaata 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 aaagcaattgcgtcgttaattcatggactatggttttggcaggaatacaatgggctaata 1232 Query: 590 gatcatatatttatggaacggcattctacaaggttattaacagttctttcttttaatatt 649 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 gatcata-attcatggaacggcattctacaaggttattaacagttctttcttttaatatt 1291 Query: 650 ttcctagccattttatggatcaccaattgccaatcaggtctgttcaaaggtgtatcgttt 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1292 ttcctagccattttatggatcaccaattgccaatcaggtctgttcaaaggtgtatcgttt 1351 Query: 710 cttaaatggcaatcattttgtagtgaggtagaatctagtgctaagagtgacattctcagn 769 |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1352 cttaaatgcaattcattttgtagtgaggtagattctagtgctaagagtgacattctcaag 1411 Query: 770 tncccctttgacagaatcgctatcctctctagac-attgccctcggcaggtattttttct 828 | ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1412 ttcccctttgacagattcgctatcctctctagacaattgccctcggcagttattttttct 1471 Query: 829 ttgg 832 |||| Sbjct: 1472 ttgg 1475 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6884 Number of Sequences: 1807 Number of extensions: 6884 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)