BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF11RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 1378 0.0 >3x_Contig1497 Length = 11582 Score = 1378 bits (695), Expect = 0.0 Identities = 760/778 (97%), Gaps = 4/778 (0%) Strand = Plus / Minus Query: 80 gagtaaaaaaatgtgaacagcacatggttcgcaagtcatcattcaaagtaatttgaaacc 139 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1755 gagtaaaaaaatgtcaacagcacatggttcgcaagtcatcattcaaagtaatttgaaacc 1696 Query: 140 aactttgaacgatctaaatcctcctatgacttcttcgcaacttcagtacagtcctacgat 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 aactttgaacgatctaaatcctcctatgacttcttcgcaacttcagtacagtcctacgat 1636 Query: 200 gtctttaaaaggtggcaagggttcgaataaggtgaatatcatggctagtccagttcagat 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 gtctttaaaaggtggcaagggttcgaataaggtgaatatcatggctagtccagttcagat 1576 Query: 260 caagttaagtgaaccaccggctttacgtgagactaaagccgttaagacatctaaatcaaa 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 caagttaagtgaaccaccggctttacgtgagactaaagccgttaagacatctaaatcaaa 1516 Query: 320 gaaaaatggtgctggaggatctggttctaacggtaagaatgaaatggtattcgtgaatta 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1515 gaaaaatggtgctggaggatctggttctaacggtaagaatgaaatggtattcgtgaatta 1456 Query: 380 ctctgtgcaagacactatagaaacgcaaaagaagaagaagaaacaatctaagagggatcg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1455 ctctgtgcaagacactatagaaacgcaaaagaagaagaagaaacaatctaagagggatcg 1396 Query: 440 aatgctgagaatttttaccggaaataataacagtggtaataatgacggtaggtcagcttc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1395 aatgctgagaatttttaccggaaataataacagtggtaataatgacggtaggtcagcttc 1336 Query: 500 cagtcccggttcgagttcgacaatcatagctagtaaaactttgactgttcagtctgcacc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 cagtcccggttcgagttcgacaatcatagctagtaaaactttgactgttcagtctgcacc 1276 Query: 560 ggcatctgccgccaagagaacttatgggtctttcttgaaatgccacaggtataacccaag 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 ggcatctgccgccaagagaacttatgggtctttcttgaaatgccacaggtataacccaag 1216 Query: 620 caatgccgttgttgaatctgagcaaatggatgaaatagttncaagatctgaacctattcc 679 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1215 caatgccgttgttgaatctgagcaaatggatgaaatagttccaagatctgaacctattcc 1156 Query: 680 anatggacannaacctgctttgacaagatctgctagctcttacgtngccttggtgagaaa 739 | ||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||| Sbjct: 1155 aaatggacaaaaacctgctttgacaagatctgctagctctaacgtggctttggtgagaaa 1096 Query: 740 c-atggtagatgctctttagcccaatcagctcagaaattcttc-aaagcgaacaatttga 797 | |||||||||||||||||||||||||||||||||||||| || ||||||||||||| || Sbjct: 1095 caatggtagatgctctttagcccaatcagctcagaaattcgtcaaaagcgaacaattgga 1036 Query: 798 aaagat-gacttgctgaagttt-atatagcttaatcagcacgtattggaactcaaact 853 |||||| ||||||||||||||| |||||||| |||||||| ||| |||| |||||||| Sbjct: 1035 aaagatggacttgctgaagtttaatatagctaaatcagcaggtaatggagctcaaact 978 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7495 Number of Sequences: 1807 Number of extensions: 7495 Number of successful extensions: 98 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)