BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZF11RM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1497                                                        1378   0.0  

>3x_Contig1497 
          Length = 11582

 Score = 1378 bits (695), Expect = 0.0
 Identities = 760/778 (97%), Gaps = 4/778 (0%)
 Strand = Plus / Minus

                                                                        
Query: 80   gagtaaaaaaatgtgaacagcacatggttcgcaagtcatcattcaaagtaatttgaaacc 139
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 gagtaaaaaaatgtcaacagcacatggttcgcaagtcatcattcaaagtaatttgaaacc 1696

                                                                        
Query: 140  aactttgaacgatctaaatcctcctatgacttcttcgcaacttcagtacagtcctacgat 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 aactttgaacgatctaaatcctcctatgacttcttcgcaacttcagtacagtcctacgat 1636

                                                                        
Query: 200  gtctttaaaaggtggcaagggttcgaataaggtgaatatcatggctagtccagttcagat 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 gtctttaaaaggtggcaagggttcgaataaggtgaatatcatggctagtccagttcagat 1576

                                                                        
Query: 260  caagttaagtgaaccaccggctttacgtgagactaaagccgttaagacatctaaatcaaa 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 caagttaagtgaaccaccggctttacgtgagactaaagccgttaagacatctaaatcaaa 1516

                                                                        
Query: 320  gaaaaatggtgctggaggatctggttctaacggtaagaatgaaatggtattcgtgaatta 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 gaaaaatggtgctggaggatctggttctaacggtaagaatgaaatggtattcgtgaatta 1456

                                                                        
Query: 380  ctctgtgcaagacactatagaaacgcaaaagaagaagaagaaacaatctaagagggatcg 439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 ctctgtgcaagacactatagaaacgcaaaagaagaagaagaaacaatctaagagggatcg 1396

                                                                        
Query: 440  aatgctgagaatttttaccggaaataataacagtggtaataatgacggtaggtcagcttc 499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 aatgctgagaatttttaccggaaataataacagtggtaataatgacggtaggtcagcttc 1336

                                                                        
Query: 500  cagtcccggttcgagttcgacaatcatagctagtaaaactttgactgttcagtctgcacc 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 cagtcccggttcgagttcgacaatcatagctagtaaaactttgactgttcagtctgcacc 1276

                                                                        
Query: 560  ggcatctgccgccaagagaacttatgggtctttcttgaaatgccacaggtataacccaag 619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 ggcatctgccgccaagagaacttatgggtctttcttgaaatgccacaggtataacccaag 1216

                                                                        
Query: 620  caatgccgttgttgaatctgagcaaatggatgaaatagttncaagatctgaacctattcc 679
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1215 caatgccgttgttgaatctgagcaaatggatgaaatagttccaagatctgaacctattcc 1156

                                                                        
Query: 680  anatggacannaacctgctttgacaagatctgctagctcttacgtngccttggtgagaaa 739
            | |||||||  ||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 1155 aaatggacaaaaacctgctttgacaagatctgctagctctaacgtggctttggtgagaaa 1096

                                                                        
Query: 740  c-atggtagatgctctttagcccaatcagctcagaaattcttc-aaagcgaacaatttga 797
            | |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 1095 caatggtagatgctctttagcccaatcagctcagaaattcgtcaaaagcgaacaattgga 1036

                                                                      
Query: 798  aaagat-gacttgctgaagttt-atatagcttaatcagcacgtattggaactcaaact 853
            |||||| ||||||||||||||| |||||||| |||||||| ||| |||| ||||||||
Sbjct: 1035 aaagatggacttgctgaagtttaatatagctaaatcagcaggtaatggagctcaaact 978


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7495
Number of Sequences: 1807
Number of extensions: 7495
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)