BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZG06RM1.SCF screened BAC_end
         (973 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig985                                                         1647   0.0  

>3x_Contig985 
          Length = 5529

 Score = 1647 bits (831), Expect = 0.0
 Identities = 898/915 (98%), Gaps = 5/915 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 3760

                                                                        
Query: 108  atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3761 atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 3820

                                                                        
Query: 168  taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3821 taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 3880

                                                                        
Query: 228  atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 3940

                                                                        
Query: 288  atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 4000

                                                                        
Query: 348  aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 4060

                                                                        
Query: 408  ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 4120

                                                                        
Query: 468  cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 4180

                                                                        
Query: 528  agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 4240

                                                                        
Query: 588  gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 4300

                                                                        
Query: 648  ccgatctcaacgccatcactaacaaagctttataatttgacaagaacaagccgattgtgg 707
            ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||
Sbjct: 4301 ccgatctcaacgccatcactaacaaagcttataaatttgacaagaacaagccgattgtgg 4360

                                                                        
Query: 708  ngcaatgtcaagtgttagagaaaaaatatttaagacttacttctgaacccagatccggc- 766
             |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 4361 ggcaatgtcaagtgttagagaaaaaatatttaagacttacttctgaa-ccagatccggca 4419

                                                                        
Query: 767  aaagtacgcccgttgtccattttaattaaagctcttgactggattgtga-caagtttcat 825
            |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 4420 aaagtacgcccgttgtccatgttaattaaagctcttgactggattgtgaccaagtttcat 4479

                                                                        
Query: 826  agcggntcgtgctcttatcagtattnctgtgatcagntgaaatctataaggcaggacttg 885
            ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 4480 agcggttcgtgctcttatcagtatttctgtgatcagttgaaatctataaggcaggacttg 4539

                                                                        
Query: 886  aaagtgcaaatgatcgagaatgattttactggtactgtttat-agaagcatgc-cgcgca 943
            ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||
Sbjct: 4540 aaagtgcaaatgatcgagaatgattttactgttactgtttataagacgcatgcacgcgca 4599

                           
Query: 944  gcttttgaaaacgga 958
            ||| |||| ||||||
Sbjct: 4600 gctcttgagaacgga 4614


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6039
Number of Sequences: 1807
Number of extensions: 6039
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)