BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZH04FM1.SCF screened BAC_end
         (894 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig863                                                          466   e-131

>3x_Contig863 
          Length = 2811

 Score =  466 bits (235), Expect = e-131
 Identities = 301/314 (95%), Gaps = 7/314 (2%)
 Strand = Plus / Plus

                                                                        
Query: 87   cgtctaccgttccgccccacaaacaaattaccggcaataacgccgccccatcacgtcggg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 cgtctaccgttccgccccacaaacaaattaccggcaataacgccgccccatcacgtcggg 2092

                                                                        
Query: 147  taacaagtatgtatacaattttcaatttggaactttttttccgaccccctttccctatcg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 taacaagtatgtatacaattttcaatttggaactttttttccgaccccctttccctatcg 2152

                                                                        
Query: 207  gcaccctttgctccatttgtccttgatccctgcctaggtggcccctgagtggcttncctg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2153 gcaccctttgctccatttgtccttgatccctgcctaggtggcccctgagtggcttccctg 2212

                                                                        
Query: 267  cttggtttcctggatgtgatcggactaacggag-agtactcacgaactt-cactttttcc 324
            ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||
Sbjct: 2213 cttggtttcctggatgtgatcggactaacggagaagtactcacgaacttccacttttccc 2272

                                                                        
Query: 325  tggcatcc-gtttcaggaaaaacttttc-atttg-acaagc-atcttctttcta-taagt 379
            |||||||| ||| ||||||||||| | | ||||| |||||| |||||||| ||| |||||
Sbjct: 2273 tggcatccggttccaggaaaaactatactatttgaacaagcaatcttcttcctattaagt 2332

                          
Query: 380  aatactacgaaggg 393
            ||||||||||||||
Sbjct: 2333 aatactacgaaggg 2346


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,793
Number of Sequences: 1807
Number of extensions: 39793
Number of successful extensions: 3108
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)