BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZH06RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1538 1405 0.0 >3x_Contig1538 Length = 9120 Score = 1405 bits (709), Expect = 0.0 Identities = 760/773 (98%), Gaps = 5/773 (0%) Strand = Plus / Plus Query: 47 tggcagaaatggttaatcaagtggttaacacgtcattgatggataatgcacaaacagccc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 tggcagaaatggttaatcaagtggttaacacgtcattgatggataatgcacaaacagccc 1620 Query: 107 aagtgcccactactgaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 aagtgcccactactgaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcga 1680 Query: 167 agtcgaaaagtagaagtggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 agtcgaaaagtagaagtggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaag 1740 Query: 227 atacaaaaaagaaaggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 atacaaaaaagaaaggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctc 1800 Query: 287 ttgatccagaacttgtgaaagaaagtgcatcacaggcagctgtagctccagatgccaagg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 ttgatccagaacttgtgaaagaaagtgcatcacaggcagctgtagctccagatgccaagg 1860 Query: 347 acacaacggatgtgtcccatttaagtactagtgatggatttgacctacatcaaatcatgc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 acacaacggatgtgtcccatttaagtactagtgatggatttgacctacatcaaatcatgc 1920 Query: 407 aaaatgccatgtcgatggcatttcaagaacaagtacaaaatcaactacatccatcggtta 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 aaaatgccatgtcgatggcatttcaagaacaagtacaaaatcaactacatccatcggtta 1980 Query: 467 tggaacgtttcgacaaagaactttccgaaagtcaattctcagatggcctgtcccggaaaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tggaacgtttcgacaaagaactttccgaaagtcaattctcagatggcctgtcccggaaaa 2040 Query: 527 ccattggagatagatcagttttgagatctcgctttgttccaccaaagaagaaaaagaagg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 ccattggagatagatcagttttgagatctcgctttgttccaccaaagaagaaaaagaagg 2100 Query: 587 agaagaagaaaggagagttaaagtttaacaatatccatggcggactttcgaataccaaat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 agaagaagaaaggagagttaaagtttaacaatatccatggcggactttcgaataccaaat 2160 Query: 647 tcagcggatctaat-aaacaaatgtcggctctaaaattgttgttttcaagcctcagaaaa 705 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 tcagcggatctaataaaacaaatgtcggctctaaaattgttgttttcaagcctcagaaaa 2220 Query: 706 t-aaacacgaactagtcaataagggtttatcnnacacagaggaacgttttagaaaggnaa 764 | ||||||||||||||||||||||||||||| |||||||||||||| |||| | || Sbjct: 2221 tcaaacacgaactagtcaataagggtttatcaacaacagaggaacgtttaagaa--ggaa 2278 Query: 765 atatagt-aaatagccagagaatgtgccaagactgtcaagagactgactactg 816 ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2279 atatagtaaaatagccagagaatgtgccaagactgcaaagagactgactactg 2331 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7507 Number of Sequences: 1807 Number of extensions: 7507 Number of successful extensions: 98 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)