BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZA05RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1731 1241 0.0 >3x_Contig1731 Length = 24233 Score = 1241 bits (626), Expect = 0.0 Identities = 701/718 (97%), Gaps = 6/718 (0%) Strand = Plus / Minus Query: 48 tctgttgtttctggtgggaaggtcgctcttcctaggatt-acaatagatccgcgactaga 106 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15505 tctgttgtttctggtgggaaggtcgctcttcctaggattcacaatagatccgcgactaga 15446 Query: 107 aaatcggtgagttgtcttactcaggacgggtcagcatacattgtccctttcaacaatcag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15445 aaatcggtgagttgtcttactcaggacgggtcagcatacattgtccctttcaacaatcag 15386 Query: 167 ttcaaagtgtattcaattgatactagacaatgtattaagacattgaaatttgctaataat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15385 ttcaaagtgtattcaattgatactagacaatgtattaagacattgaaatttgctaataat 15326 Query: 227 gatattttgacttcgatactcgatgagccttctgtagaggtggtgcatatcgagcctatt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15325 gatattttgacttcgatactcgatgagccttctgtagaggtggtgcatatcgagcctatt 15266 Query: 287 attgacgatgagatggataagatcagagtgtataccaacactgcgaaagtagttatattg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15265 attgacgatgagatggataagatcagagtgtataccaacactgcgaaagtagttatattg 15206 Query: 347 aagtataagggtaaattagccacggagattaaaacttggtctttgaatattactggcgag 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15205 aagtataagggtaaattagccacggagattaaaacttggtctttgaatattactggcgag 15146 Query: 407 ttatttgcagttcttggcgatgggaagaaattacttacagttcagaaaacagggaactct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15145 ttatttgcagttcttggcgatgggaagaaattacttacagttcagaaaacagggaactct 15086 Query: 467 tacagatatgatctatatgaaaacgttgaagagaaagaggaagaatctgaggttaaacac 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15085 tacagatatgatctatatgaaaacgttgaagagaaagaggaagaatctgaggttaaacac 15026 Query: 527 cttgaaacttttgagaatgttttactttcaacttggtctaataacaataactaccttgcc 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15025 cttgaaacttttgagaatgttttactttcaacttggtctaataacaataactaccttgcc 14966 Query: 587 ctagtttatttgaaccaggaaact-aaaaacatgtgctgatcaaatctatggtcgac-ac 644 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 14965 ctagtttatttgaaccaggaaactaaaaaacatgtgctgatcaaatctatggtcgacaac 14906 Query: 645 agttcagttagaaacttccca-taccatctac-acatcttataccaccataaatt-ccat 701 ||||||||| ||||||||| |||||||||| |||||| |||||||||||||| |||| Sbjct: 14905 agttcagttcagaacttcccagtaccatctacaacatctagtaccaccataaattcccat 14846 Query: 702 tttggcactggttttgcgttagataacgacgggcagcaatgggctattggatttgcat 759 |||| ||||| | ||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 14845 tttgtcactgctcttgcgttagataacgacggccagcagttggctattggatttgcat 14788 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7138 Number of Sequences: 1807 Number of extensions: 7138 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)