BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZA09RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1544 1257 0.0 >3x_Contig1544 Length = 10626 Score = 1257 bits (634), Expect = 0.0 Identities = 731/753 (97%), Gaps = 8/753 (1%) Strand = Plus / Minus Query: 45 ctttggccttaagaccatattatactgacgactcttcgctgaataatggcacgtattcca 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9714 ctttggccttaagaccatattatactgacgactcttcgctgaataatggcacgtattcca 9655 Query: 105 cgttgtatctgatggtccagttggttaatagcaccactggtcagccatttgaatcggatg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9654 cgttgtatctgatggtccagttggttaatagcaccactggtcagccatttgaatcggatg 9595 Query: 165 gtagtacaattgcagatgatgatgagcggtggtcgtaccagatttccatatcttattgtg 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 9594 gtagtacaattgcagatgatgatgagcggtggtcgtaccagatttccatatctcagcgtg 9535 Query: 225 atcttgtctttcaatgggataaacgtccgtggcttgatgtcgttgacactgattacaatt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9534 atcttgtctttcaatgggataaacgtccgtggcttgatgtcgttgacactgattacaatt 9475 Query: 285 ctgctttgttggttactggtaatgtcacagctatgtcgaagaccacatctaattattcga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9474 ctgctttgttggttactggtaatgtcacagctatgtcgaagaccacatctaattattcga 9415 Query: 345 tctatgatgtcagcctttatgatatatacatctatgggttcgaatatgccgaatactttg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9414 tctatgatgtcagcctttatgatatatacatctatgggttcgaatatgccgaatactttg 9355 Query: 405 ataatttgaacctatctcattccctttgtgccattcagaatgggccttatctaatttcat 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9354 ataatttgaacctatctcattccctttgtgccattcagaatgggccttatctaatttcat 9295 Query: 465 cggctaatggctcattgaacggaactaataatggtaatacagcagaaaatgcatctctat 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9294 cggctaatggctcattgaacggaactaataatggtaatacagcagaaaatgcatctctat 9235 Query: 525 cttctacaactctatcagttcataaatctattacggtacgcgggggtagcgcttaggaac 584 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9234 cttctacaactctatcagttcataaatctattacggtacgcgggggtagcgctaaggaac 9175 Query: 585 atttccatataactggcttaaattcgtc-accacgtacgttgcatatgtcacaaagaaat 643 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9174 aattccatataactggcttaaattcgtcaaccacgtacgttgcatatgtcacaaagaaat 9115 Query: 644 tagcca-cagcacaaagg-attggaagattctgggggtg-tctattntctaagcaa-tat 699 |||||| ||||||||||| ||||||||||||||| |||| |||||| ||||||||| ||| Sbjct: 9114 tagccaccagcacaaaggaattggaagattctggtggtgttctattttctaagcaattat 9055 Query: 700 ttgaga-catggatgattcatcttg-tcactcatttttggattggaattttg-gaagggg 756 |||||| |||||||||||||||||| |||||||| |||||||||| |||||| || || | Sbjct: 9054 ttgagaccatggatgattcatcttgttcactcatctttggattgggattttgtgatggtg 8995 Query: 757 ttggatatttggtaccatcctggtctttactgg 789 ||| ||||| ||||||||||| ||||||||||| Sbjct: 8994 ttgcatattcggtaccatcctcgtctttactgg 8962 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7001 Number of Sequences: 1807 Number of extensions: 7001 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)