BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZB06FM1.SCF screened BAC_end (902 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 654 0.0 >3x_Contig1724 Length = 20938 Score = 654 bits (330), Expect = 0.0 Identities = 519/573 (90%), Gaps = 7/573 (1%) Strand = Plus / Minus Query: 97 catttttgatgttcgaatatacatgctatatgaataatgattaaatgagaaagtatatgt 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8689 catttttgatgttcgaatatacatgctatatgaataatgattaaatgagaaagtatatgt 8630 Query: 157 acgaagttcttaaaacttggtgtttttagttattgattttgcataataagaatcctttct 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8629 acgaagttcttaaaacttggtgtttttagttattgattttgcataataagaatcctttct 8570 Query: 217 tttcttcaatccacttgnttttattttcttttgtattatactttgcctctttgctctttc 276 | ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 8569 tctcttcaatccacttgtttttattttcttttgtattatacttttcctcttttctctttc 8510 Query: 277 gtatatacac-gtacttaatttggagttcacttccgatcattagaagcataacgagaacg 335 |||||||||| ||| | ||| | ||| ||| | ||||||||||||||||||||||||| Sbjct: 8509 gtatatacacggtatatgattcgaagtcaactacggatcattagaagcataacgagaacg 8450 Query: 336 atgtctacttcatctgaagcagtgccaaattccggtggtaaattgcagtttaccttgaag 395 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8449 atgtctactccatctgaagcagtgccaaaatccggtggtaaattgcagtttaccttgaag 8390 Query: 396 acccctaaaggtaccaaggactgtgctgaaaa-gatttggttatcagagaagccattttt 454 |||||||| |||||||||||||| |||||||| ||| ||||||||||||| ||||||||| Sbjct: 8389 acccctaagggtaccaaggactgggctgaaaaggatatggttatcagagaggccattttt 8330 Query: 455 agtcaatttgtcctctttgttc-agagacacgggggtattacattggatacacctgtctt 513 |||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 8329 agtcaa-ttgtcgtctttgttcaagagacacggtggtattacattggatacacctgtctt 8271 Query: 514 cgaactacttaagat-ctacctgttagttacgggaaggattcc-agttaa-ttataactt 570 |||||||| | |||| ||| ||| || ||||| |||||||| |||||| ||||||||| Sbjct: 8270 cgaactacgtgagatcctagctggtaagtacggtgaggattccaagttaatttataactt 8211 Query: 571 gaaagatcaagggggtgaactttttttttttggttataacttgacccttccctttggtaa 630 | |||||||||| |||||||| | || ||| ||||| |||||||| |||| |||| || Sbjct: 8210 ggaagatcaaggtggtgaactatgttctttgcgttatgacttgaccgttccatttgctag 8151 Query: 631 aaattttgcccttaacaaggttcaatcctttaa 663 | || ||||| | ||||| ||||||||| |||| Sbjct: 8150 atatgttgccatgaacaatgttcaatccattaa 8118 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,158 Number of Sequences: 1807 Number of extensions: 15158 Number of successful extensions: 100 Number of sequences better than 1.0e-20: 1 length of query: 902 length of database: 10,358,551 effective HSP length: 16 effective length of query: 886 effective length of database: 10,329,639 effective search space: 9152060154 effective search space used: 9152060154 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)