BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZB07FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1009 1021 0.0 >3x_Contig1009 Length = 4650 Score = 1021 bits (515), Expect = 0.0 Identities = 580/595 (97%), Gaps = 5/595 (0%) Strand = Plus / Plus Query: 85 caggtttcgctacccactctgtgaagacaaataaagcgtacctgtcctatttgactatgg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 caggtttcgctacccactctgtgaagacaaataaagcgtacctgtcctatttgactatgg 1667 Query: 145 gattcaccattccatttgtcgtttcatactattcgacttattctagtgctcaggatgagt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 gattcaccattccatttgtcgtttcatactattcgacttattctagtgctcaggatgagt 1727 Query: 205 tgaaaggaaggtcaaatccaagattatatttcggaaggttcctatgatcggtttaaatca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1728 tgaaaggaaggtcaaatccaagattatatttcggaaggttcctatgatcggtttaaatca 1787 Query: 265 tggactacttgtatgaaaaaggttgcaggacttatgcctttttttttatgaatagttttt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1788 tggactacttgtatgaaaaaggttgcaggacttatgcctttttttttatgaatagttttt 1847 Query: 325 tcccctcctttccccgacttcaattcaatatcccttccgcgactattctcttctctattt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1848 tcccctcctttccccgacttcaattcaatatcccttccgcgactattctcttctctattt 1907 Query: 385 tatttcgacggttaaattaagagtcaattatttctctagactctctctggttatggtttt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 tatttcgacggttaaattaagagtcaattatttctctagactctctctggttatggtttt 1967 Query: 445 agatagatcatcagctataactatatttttataatgtaaggaattatactttttcactaa 504 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1968 agatagatcatcagttataactatatttttataatgtaaggaattatactttttcactaa 2027 Query: 505 atttaactcaatcttctcttctctcatactttccaggtaataccactttatgactggaat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2028 atttaactcaatcttctcttctctcatactttccaggtaataccactttatgactggaat 2087 Query: 565 gacacaaagagcccgttattagcccaacatgacccacgtc-aaggaccccattaccctgg 623 ||||||||||||| || ||||||| ||||||| ||||||| ||||||||||||| ||||| Sbjct: 2088 gacacaaagagccagtaattagccaaacatga-ccacgtcaaaggaccccatta-cctgg 2145 Query: 624 gatcagagtaaactttttttttagacccggtgagttgtacaagtttgatccggtc 678 || |||||||||| || | | ||| ||||||||||||||||| ||||||||||| Sbjct: 2146 gaacagagtaaacattatatcaaga-ccggtgagttgtacaag-ttgatccggtc 2198 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8040 Number of Sequences: 1807 Number of extensions: 8040 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)