BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZB09FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1774 1122 0.0 >3x_Contig1774 Length = 27771 Score = 1122 bits (566), Expect = 0.0 Identities = 656/677 (96%), Gaps = 7/677 (1%) Strand = Plus / Minus Query: 86 atcaaatgatttttaagataaaaaggtagaccaaaataataataccaaacaaacccaatc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16951 atcaaatgatttttaagataaaaaggtagaccaaaataataataccaaacaaacccaatc 16892 Query: 146 gggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacatcaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16891 gggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacatcaat 16832 Query: 206 gagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgaggatcac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16831 gagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgaggatcac 16772 Query: 266 ttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtggaatc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16771 ttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtggaatc 16712 Query: 326 tcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcctggc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16711 tcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcctggc 16652 Query: 386 ttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaacggt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16651 ttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaacggt 16592 Query: 446 gcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagcagaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16591 gcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagcagaa 16532 Query: 506 acagtgcatcctatccgtgcattgcacttgttggggtcaatcaatgntcttgatcgtaac 565 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 16531 acagtgcatcctatccgtgcattgcacttgttggggtcaatcaatg-tcttgatcgtaac 16473 Query: 566 aaatgcagccgggtggtatcaatgcctcctttaaggctggngatttaatgtgtgtctacg 625 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 16472 aaatgcagcc-ggtggtatcaatgcctcctttaaggctggggatttaatgtgtgtctacg 16414 Query: 626 accatatcaatttccca-gaatatgcgggttccatcctttaa-gggagct-attttgacc 682 ||||||||||||||||| || ||||||||||||||||| ||| ||||||| |||||||| Sbjct: 16413 accatatcaatttcccaggattatgcgggttccatcctctaaggggagctaattttgacg 16354 Query: 683 aa-ttggggcaagattttgggcta-cagtgaggcttatgactgggaactaccgaagcttt 740 || ||||| ||||||| | ||||| |||||| |||||||||| |||||||| ||||| | Sbjct: 16353 aatttgggccaagattcttggctaccagtgatgcttatgacttggaactacgtaagctat 16294 Query: 741 tggtttcaaaaaaaaaa 757 || ||||||| |||||| Sbjct: 16293 tgttttcaaagaaaaaa 16277 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,162 Number of Sequences: 1807 Number of extensions: 10162 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)