BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZB12FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1769 690 0.0 >3x_Contig1769 Length = 25795 Score = 690 bits (348), Expect = 0.0 Identities = 390/401 (97%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 90 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13407 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 13466 Query: 150 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13467 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 13526 Query: 210 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13527 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 13586 Query: 270 accaataacacagcattacataagagaagaagtactttttctatcaccgactggaattt- 328 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 13587 accaataacacagcattacataagagaagaggtactttttctatcaccgactggaattta 13646 Query: 329 aaagccgtncggaaaattccattcttagattggacantctgatgtttaactcttgc-ttt 387 |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 13647 aaagccgtccggaaaatcccattcttagattggacaatctgatgtttaactcttgctttt 13706 Query: 388 tttctctccctta-cagctcttgctaggaagcaattatcttgggcaggctttaagtttca 446 ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 13707 tttctctcccttagcagctcttgctaggaagcaattatcttgtgcaggcttaaagtttca 13766 Query: 447 tggagaaccctattgacctggacctgngcattgaatttcta 487 |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 13767 tggagaaccctattgacctggacctgtgcattgtatttcta 13807 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7903 Number of Sequences: 1807 Number of extensions: 7903 Number of successful extensions: 111 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)