BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZD05RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1075 1332 0.0 >3x_Contig1075 Length = 3835 Score = 1332 bits (672), Expect = 0.0 Identities = 809/842 (96%), Gaps = 11/842 (1%) Strand = Plus / Plus Query: 48 tacaagaaggcaacctcgatcaaccaaaagccttgaaatgagggaaactttatgcccagt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2013 tacaagaaggcaacctcgatcaaccaaaagccttgaaatgagggaaactttatgcccagt 2072 Query: 108 caccaggaaaaaggcaactgcctcgtcaggaaagtgttatagtacttaaaattgtgtcag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2073 caccaggaaaaaggcaactgcctcgtcaggaaagtgttatagtacttaaaattgtgtcag 2132 Query: 168 aatttttatgcagaaagaatgatctagtaatatcataaaaagttgtctgtttattttata 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2133 aatttttatgcagaaagaatgatctagtaatatcataaaaagttgtctgtttattttata 2192 Query: 228 tgttgaggatgaatgcacaggaagaagagtcaccaatggatacgcaacaactggcgtaca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2193 tgttgaggatgaatgcacaggaagaagagtcaccaatggatacgcaacaactggcgtaca 2252 Query: 288 tcgcagcccttaagagagaactcacagctaaggagcaattattgagacagacgatacagg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2253 tcgcagcccttaagagagaactcacagctaaggagcaattattgagacagacgatacagg 2312 Query: 348 catgtaacagagctgaagccaatttaaatacagacgtggtgaattacagagtttgggatc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313 catgtaacagagctgaagccaatttaaatacagacgtggtgaattacagagtttgggatc 2372 Query: 408 aattggcacagaggcagatgtacacttcgagtagatctgatccgattgggattgcgtcat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2373 aattggcacagaggcagatgtacacttcgagtagatctgatccgattgggattgcgtcat 2432 Query: 468 tgaagcagagtttgcaagttgacaacaaacaatcaatattcaatgaaacagagcaatttc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2433 tgaagcagagtttgcaagttgacaacaaacaatcaatattcaatgaaacagagcaatttc 2492 Query: 528 tagttgagatggtaaataaacagaaacagtttaatgcagatatgtcgtcattgattgtga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2493 tagttgagatggtaaataaacagaaacagtttaatgcagatatgtcgtcattgattgtga 2552 Query: 588 tgttacaagaacgtcttcgtgatgagaatcaatcaccctgaaatgccngnagatccaatt 647 ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| Sbjct: 2553 tgttacaagaacgtcttcgtgatgagaatcaatcacctgaaaatgccgg-agatccaatt 2611 Query: 648 ggaatgatttcagaaatgaagtctaaatttttcgatctaatttcgaatcatatggccgta 707 ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 2612 ggaatgattcaagaaatgaagtctaaaattttcgatctaattcgaaatcatatggccgta 2671 Query: 708 gacatttccacacca-tatactctgcagatatcgctgctgcagacattgacaa--cttat 764 ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || || Sbjct: 2672 gacatttccacaccaatatactctgcagatatcgctgctgcagacat-gacaaacctaat 2730 Query: 765 gaaaaaggttattaatggtgattcaaactta-cagtccatgactttca-ccagatgg-at 821 || || | | |||||||||||||||| | || ||||||||||||| || |||||| | || Sbjct: 2731 gagaaggttaattaatggtgattcaaccctaacagtccatgacttccaaccagattgtat 2790 Query: 822 gaatttgttttcggat-ctggatacagcgtatttattaccaaaaat-gatatgaatggga 879 |||||||||| ||||| ||||||||||||||| |||||| ||| || ||||||||||||| Sbjct: 2791 gaatttgttt-cggatactggatacagcgtatctattacaaaagatagatatgaatggga 2849 Query: 880 ct 881 || Sbjct: 2850 ct 2851 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6801 Number of Sequences: 1807 Number of extensions: 6801 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)