BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC44ZD06RM1.SCF screened BAC_end
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig89 973 0.0
>3x_Contig89
Length = 784
Score = 973 bits (491), Expect = 0.0
Identities = 518/527 (98%)
Strand = Plus / Plus
Query: 44 tagagaaatgttacaagttgtacgcaagaagcctacaggatccgcatgatgctggtaaat 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tagagaaatgttacaagttgtacgcaagaagcctacaggatccgcatgatgctggtaaat 134
Query: 104 cctggcaaataactgataaatctggtatgtcacctttactgctattgcaatcgatggtta 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctggcaaataactgataaatctggtatgtcacctttactgctattgcaatcgatggtta 194
Query: 164 tgaataaggcagggtataagaggaaactactcaataaggatgtcaagagtggaaaatcct 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tgaataaggcagggtataagaggaaactactcaataaggatgtcaagagtggaaaatcct 254
Query: 224 actccagatgtttcaattttggttccaatgtcaacatgcagttaggtaccggtgataata 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 actccagatgtttcaattttggttccaatgtcaacatgcagttaggtaccggtgataata 314
Query: 284 atgatagattaacctcatggtatgaaattgattcttggaagatgtgtgataatgatctaa 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgatagattaacctcatggtatgaaattgattcttggaagatgtgtgataatgatctaa 374
Query: 344 gatttaaatcatgctgtatgaccaaatactactctctgttattgatggtagacaaggatg 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gatttaaatcatgctgtatgaccaaatactactctctgttattgatggtagacaaggatg 434
Query: 404 gaacaaattcagcatacatcactggccgttctacgaaattaaatttgtttggaaaaagag 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaacaaattcagcatacatcactggccgttctacgaaattaaatttgtttggaaaaagag 494
Query: 464 atctcttcaggtatgtaaaattctctgacaagaaattacaagatatcaagtgctccaatc 523
||||||||| ||||||||||| |||| |||| ||||||||| ||||||| | ||||||||
Sbjct: 495 atctcttcatgtatgtaaaatgctcttacaataaattacaatatatcaatttctccaatc 554
Query: 524 atcatataattgccaaaacaaccaatggaaatatacttttatggggg 570
||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 555 atcatattatttccaaaacaaccaatggaaatatacttttatggggg 601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7911
Number of Sequences: 1807
Number of extensions: 7911
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)