BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZD07RM1.SCF screened BAC_end (845 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1456 311 1e-84 >3x_Contig1456 Length = 10138 Score = 311 bits (157), Expect = 1e-84 Identities = 157/157 (100%) Strand = Plus / Plus Query: 46 gctttatagagtttggcgtataaatgaagaacgccaatctcaacaccaccatcaaaactt 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9600 gctttatagagtttggcgtataaatgaagaacgccaatctcaacaccaccatcaaaactt 9659 Query: 106 gcgattcatacagaatattctgatgggccgatgttacactatttccatcttcaactgtta 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9660 gcgattcatacagaatattctgatgggccgatgttacactatttccatcttcaactgtta 9719 Query: 166 gtcgaatgatatctaaaaccgtgttgatattcttcat 202 ||||||||||||||||||||||||||||||||||||| Sbjct: 9720 gtcgaatgatatctaaaaccgtgttgatattcttcat 9756 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 52,850 Number of Sequences: 1807 Number of extensions: 52850 Number of successful extensions: 3787 Number of sequences better than 1.0e-20: 1 length of query: 845 length of database: 10,358,551 effective HSP length: 16 effective length of query: 829 effective length of database: 10,329,639 effective search space: 8563270731 effective search space used: 8563270731 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)