BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZD08FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1543 1039 0.0 >3x_Contig1543 Length = 9648 Score = 1039 bits (524), Expect = 0.0 Identities = 673/707 (95%), Gaps = 12/707 (1%) Strand = Plus / Plus Query: 86 agacgagaaatagctctccatttcacattctttcttctgatcaccagacgattcaacgca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7522 agacgagaaatagctctccatttcacattctttcttctgatcaccagacgattcaacgca 7581 Query: 146 gggtataccgtacacctgagcgtgttttatttgttacccgcacttgcgtcgaatatcttc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7582 gggtataccgtacacctgagcgtgttttatttgttacccgcacttgcgtcgaatatcttc 7641 Query: 206 actaagtcgtcaatttccgacatttaaacagcttcaagctgaaaaagcgacacattcaca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7642 actaagtcgtcaatttccgacatttaaacagcttcaagctgaaaaagcgacacattcaca 7701 Query: 266 acaaatatattgacacaaaagcatgttgcatgtatctaacctgcagtaagttacatttac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7702 acaaatatattgacacaaaagcatgttgcatgtatctaacctgcagtaagttacatttac 7761 Query: 326 gaaaacattttaaagctgttcgatcagtggcaagcaattcataagaatcaagtttcactg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7762 gaaaacattttaaagctgttcgatcagtggcaagcaattcataagaatcaagtttcactg 7821 Query: 386 aatcatttttctctttccaagatgactgattgtaatagtacaacggagcgcagtttgacg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7822 aatcatttttctctttccaagatgactgattgtaatagtacaacggagcgcagtttgacg 7881 Query: 446 tctggattggaagcantgtcattgaaggcaatatccccatcgaaagttgattag-aggca 504 ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||| Sbjct: 7882 tctggattggaagcaatgtcattgaaggcaatatccccatcg-aagttgaatagaaggca 7940 Query: 505 taaagtctcgagcaaacctgattaattgaatgaaaatgtctgtttggatcgcagagcaga 564 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 7941 t-aagtctcgagcaaacctgataaattgaatgaaaatgtctgtttggatcgcagagcaga 7999 Query: 565 agtttttgttaaatac-gaaaatgaaatgcc-acagaaaattgtcagtaagataaagaaa 622 |||||| ||| ||||| |||||||||||||| |||| |||||||||||||||||||||| Sbjct: 8000 agttttggtt-aatacggaaaatgaaatgccaacag-aaattgtcagtaagataaagaac 8057 Query: 623 cgaaactttcatttgcaattggaattggaacagaag-accatgaaattttcaaaattaag 681 |||||| ||||||||||||||||||||||||||| ||||||| |||| |||| | ||| Sbjct: 8058 gaaaacttccatttgcaattggaattggaacagaagaaccatgagatttccaaattaaag 8117 Query: 682 tcaatgctcttaccttaactgaca-caccttgcattggtttaaaattaacaacaag-tta 739 ||||||||||||||| |||||||| ||||| |||| | ||| |||||| ||||| ||| Sbjct: 8118 tcaatgctcttacctaaactgacaccacctgcaattgatctaagattaacgacaagttta 8177 Query: 740 aaagacccttggt-cttccatccggaaagcaac-aaattcccggtat 784 |||||||||| || || |||||||||||||||| ||||||||||||| Sbjct: 8178 aaagaccctttgtactaccatccggaaagcaacaaaattcccggtat 8224 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7657 Number of Sequences: 1807 Number of extensions: 7657 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)