BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZD08RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1477 1128 0.0 >3x_Contig1477 Length = 9322 Score = 1128 bits (569), Expect = 0.0 Identities = 671/696 (96%), Gaps = 7/696 (1%) Strand = Plus / Minus Query: 49 tacgttcctgacgaacagtgtaccttagagaccttcgatgcagagctttggggtagatat 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8552 tacgttcctgacgaacagtgtaccttagagaccttcgatgcagagctttggggtagatat 8493 Query: 109 ttcaaacttgtcttgtgtattgctaaccataagactgttaactctactcctctagcacct 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8492 ttcaaacttgtcttgtgtattgctaaccataagactgttaactctactcctctagcacct 8433 Query: 169 ttgccgaggaaagctgtgtatttggtgaccggagacttgattggccgagcatcgtacata 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8432 ttgccgaggaaagctgtgtatttggtgaccggagacttgattggccgagcatcgtacata 8373 Query: 229 ctcgagcaaatctgggacattttgggtgacaattgtattggtaccgatcttgataataag 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8372 ctcgagcaaatctgggacattttgggtgacaattgtattggtaccgatcttgataataag 8313 Query: 289 tatggtattctaagatcttcggtgtatcaaatgacatttttgactgcagctatggatata 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8312 tatggtattctaagatcttcggtgtatcaaatgacatttttgactgcagctatggatata 8253 Query: 349 gttacagacttctgtgcgttttcattcttacgtcatgtagatgcaagaagggtaggtagt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8252 gttacagacttctgtgcgttttcattcttacgtcatgtagatgcaagaagggtaggtagt 8193 Query: 409 aaaatcatttgggttgtactaattttggtttggacgaacgaaaattcattaaccacagct 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8192 aaaatcatttgggttgtactaattttggtttggacgaacgaaaattcattaaccacagct 8133 Query: 469 attgaagagctaactcctcaatttttcaatgcatacccagaagg-tgcattgagaccaac 527 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 8132 attgaagagctaactcctcaatttttcaatgcatacc-agaagggtgcattgagaccaac 8074 Query: 528 cgtattcgaagtggagatatttttggacactttgntgcatgttattcatcttgataccga 587 |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 8073 cgtattcgaagtggagatatttttggacactttgttgcatgttattcatctcgataccga 8014 Query: 588 -gacagcattaaggacactcttttcaataatgttcgtttcttgaaggaatttctactctt 646 ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 8013 ggacagcattaaggacactcttttcaattatgttcgtttcttgaaggagtttctactc-t 7955 Query: 647 cgtt-gctgaaacaga-gatttttcattccgggaagaaattgatgattaccgaactgtcc 704 |||| ||||||||||| ||| || ||| | | |||||| |||||||| || |||||| | Sbjct: 7954 cgttggctgaaacagaggatattccatccggtgaagaatttgatgatgacagaactgcca 7895 Query: 705 accaattaacaaatttttggttacctaatgtccatg 740 |||||| || ||| ||||| ||||||||||||||| Sbjct: 7894 gccaatt-acgaatctttggctacctaatgtccatg 7860 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7117 Number of Sequences: 1807 Number of extensions: 7117 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)