BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZD11RM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1507 1162 0.0 >3x_Contig1507 Length = 11359 Score = 1162 bits (586), Expect = 0.0 Identities = 666/688 (96%), Gaps = 4/688 (0%) Strand = Plus / Minus Query: 44 gcttgcgtaaatatcttttgaatatgctcgttactgcgtgaacatcagtattttgctttc 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10023 gcttgcgtaaatatcttttgaatatgctcgttactgcgtgaacatcagtattttgctttc 9964 Query: 104 caaaatcgactttttcttcttctgcaaacattttctcgtattgctctatgataacctgac 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9963 caaaatcgactttttcttcttctgcaaacattttctcgtattgctctatgataacctgac 9904 Query: 164 tacctgattttctgtaaataccttcggccatcatatattcagggtctgattcgatatagt 223 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9903 tacctgattttctgtaaatac-ttcggccatcatatattcagggtctgattcgatatagt 9845 Query: 224 tgatgcatgttgtaatgattaatggaacatcccgtctttcatatgcacatcttgcaacca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9844 tgatgcatgttgtaatgattaatggaacatcccgtctttcatatgcacatcttgcaacca 9785 Query: 284 gggatgatccatagagagtttgtccatcagaactggaagatgataaactgttccttggaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9784 gggatgatccatagagagtttgtccatcagaactggaagatgataaactgttccttggaa 9725 Query: 344 cagagtcattcgacgcggaatagggaattgggaaaagtttcaggtcatcaaattcatttg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9724 cagagtcattcgacgcggaatagggaattgggaaaagtttcaggtcatcaaattcatttg 9665 Query: 404 gattctgtagcattggagcactaatttctatggatttggaagaatttggattgacctgtc 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9664 gattctgtagcattggagcactaatttctatggatttggaagaatttggattgacctgtc 9605 Query: 464 ttacattagtattcccacttccgaanagtttccaaaatcgaggttttgcaatactgctat 523 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9604 ttacattagtattcccacttccgaaaagtttccaaaatcgaggttttgcaatactgctat 9545 Query: 524 tggatgtagaaaggagtttgtttctagtaaggcttagagcattattgcttncgttgaaat 583 ||||||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 9544 tggatgtagaagggagttggtttctagtagggcttagagcattattgcttccgttgaaat 9485 Query: 584 -cacctcgtatgcgtcgtcagttaatgatttcttgtgatgtcgtcgttaattttgagatc 642 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 9484 ccacctcgtatgcgtcgtcagttaatga-ttcttgtgatgtcgtcgttaa-tttgagatc 9427 Query: 643 cggtttttcatttcaaaggctttcggtttctgacctcaaaggccctttttgaaactttaa 702 | |||||||| ||| |||| ||||||||||||| |||||| | ||||| || ||||| Sbjct: 9426 ccgtttttcaattcgaagggcttcggtttctgacgtcaaagtctcttttgtaatctttag 9367 Query: 703 tttttcaaggtcagcagttaattgagcc 730 |||||||| ||||||||||||||||||| Sbjct: 9366 tttttcaatgtcagcagttaattgagcc 9339 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7866 Number of Sequences: 1807 Number of extensions: 7866 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)