BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZE01RM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig665 1477 0.0 >3x_Contig665 Length = 2101 Score = 1477 bits (745), Expect = 0.0 Identities = 816/836 (97%), Gaps = 3/836 (0%) Strand = Plus / Minus Query: 47 tggaaaccggtatggtctcatgcaacactggtttgttcagtgagtgtaccattccattcg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 tggaaaccggtatggtctcatgcaacactggtttgttcagtgagtgtaccattccattcg 1573 Query: 107 gcggtgttaaggaatccggattcggtagagagggatctttgcacggtattgaagactata 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1572 gcggtgttaaggaatccggattcggtagagagggatctttgcacggtattgaagactata 1513 Query: 167 ctgtcatcaagactatcaccatcggaaacttgcctgctccactataaattgatgggcgta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 ctgtcatcaagactatcaccatcggaaacttgcctgctccactataaattgatgggcgta 1453 Query: 227 actgattataatagtagacgatatgtaccatatgtatatagaaacgtatttccagtagtg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1452 actgattataatagtagacgatatgtaccatatgtatatagaaacgtatttccagtagtg 1393 Query: 287 tagcaatttatatttatcctcggattaagagcggattaacatagcatgatataagttgag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 tagcaatttatatttatcctcggattaagagcggattaacatagcatgatataagttgag 1333 Query: 347 ttgattattcaacctgagttaaccagttattggaacgagaatccaattgttttctatttg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 ttgattattcaacctgagttaaccagttattggaacgagaatccaattgttttctatttg 1273 Query: 407 atagcctcgtattgactgtttcgttacgcgtagtgattgtgattacatttaacaattgat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 atagcctcgtattgactgtttcgttacgcgtagtgattgtgattacatttaacaattgat 1213 Query: 467 ttgaaaaaacgttattatggcgtaagtgaaagcttagtaacgatctgcaaagataaagcc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 ttgaaaaaacgttattatggcgtaagtgaaagcttagtaacgatctgcaaagataaagcc 1153 Query: 527 acaacagtaattagctgccactttccagtactcagtgccatccttcacttgagcttagtg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 acaacagtaattagctgccactttccagtactcagtgccatccttcacttgagcttagtg 1093 Query: 587 ggggttcagctgctgttgttttcccaccatggatntatatgaacaacttccgtccagtgg 646 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1092 ggggttcagctgctgttgttttcccaccatggatttatatgaacaacttccgtccagtgg 1033 Query: 647 tatgattcatcaaccggaatatcagttcttactggatgccgctacctttcatgggatcac 706 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1032 tatgattcatcaaccggaatacaagttcttactggatgccgctacctttcatgggatcac 973 Query: 707 ctgcttagatttcctatcccagtcaccatcttacttgatgaagaccaataatagatctat 766 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 972 ctgcttagatttcctatcccagtcaccatctaacttgatgaagaccattaatagatctat 913 Query: 767 caatgagattttaaaggttc-agccgctctacgaaatgaaattcaattggcattggcccg 825 |||||||||| ||||| ||| ||||||||||||||||||| | |||||||||||| ||| Sbjct: 912 caatgagattataaagtttcaagccgctctacgaaatgaattcgaattggcattgg-ccg 854 Query: 826 attttagaatacaagacatcacaacactgaaaggagaagaacaaaccacgaagttt 881 || ||| ||||||||||||||||||||| |||||| | ||||||||||| |||| Sbjct: 853 atattaagatacaagacatcacaacactg-aaggaggatgacaaaccacgatgttt 799 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5848 Number of Sequences: 1807 Number of extensions: 5848 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)