BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZE04RM1.SCF screened BAC_end (885 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1154 0.0 >3x_Contig1794 Length = 36744 Score = 1154 bits (582), Expect = 0.0 Identities = 690/718 (96%), Gaps = 6/718 (0%) Strand = Plus / Plus Query: 47 cgccatttttgtagctctttcctcttcttcaaagatctccatttcgttagcttccatatc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29680 cgccatttttgtagctctttcctcttcttcaaagatctccatttcgttagcttccatatc 29739 Query: 107 gtcgtcatcatctgaatcaaagtatttccttttactacctttgttgaagatagaccaaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29740 gtcgtcatcatctgaatcaaagtatttccttttactacctttgttgaagatagaccaaat 29799 Query: 167 ttcatctctatcgtacggttgtgatttggagccttgttcacactcgtctaaatcatcatc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29800 ttcatctctatcgtacggttgtgatttggagccttgttcacactcgtctaaatcatcatc 29859 Query: 227 ttcaataaagtctgagagatcttcgtcattctcactgtcataatgttgatctccgtgtct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29860 ttcaataaagtctgagagatcttcgtcattctcactgtcataatgttgatctccgtgtct 29919 Query: 287 tgccataatttgtttcttttctttaagttttaacttcttcgcaagcttttcgtttggttg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29920 tgccataatttgtttcttttctttaagttttaacttcttcgcaagcttttcgtttggttg 29979 Query: 347 tgcaaaacggttgaaagactttaccatcactttcgacttcggttcttttacaggtttagc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29980 tgcaaaacggttgaaagactttaccatcactttcgacttcggttcttttacaggtttagc 30039 Query: 407 atctttcgttgccgcctttggtttagcggctttatcaaatccgagtttcttcgggagcgg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30040 atctttcgttgccgcctttggtttagcggctttatcaaatccgagtttcttcgggagcgg 30099 Query: 467 cttcttgtcttcctttggtccttccctagacttctgctctgctcgcttcattaattcatc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30100 cttcttgtcttcctttggtccttccctagacttctgctctgctcgcttcattaattcatc 30159 Query: 527 aaacgatagtttcttgattggctcccttttc-gtaccacgacaggatactttccgcttgt 585 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 30160 aaacgatagtttcttgattggctcccttttcggtaccacgacaggatactttccgcttgt 30219 Query: 586 ggtattgacaccaggttttttctttataatgggag-ctcattctttcgcgatgacgcttt 644 |||||||||||||||||||||||| ||| |||| |||| |||| ||||||||||||| Sbjct: 30220 ggtattgacaccaggttttttcttataaattggagcctca-tcttcggcgatgacgcttt 30278 Query: 645 atgcctgggcttaacaacaggtttagatcgagtgggatgatataacttgctttaacctaa 704 |||||||| |||| || ||||||||| |||| |||||||||| ||||||| ||||| | Sbjct: 30279 atgcctggccttagcagcaggtttag-tcgatgtggatgatataccttgcttcaacct-a 30336 Query: 705 cgcgcttcctttttattttgaaatgccgggtcaactt-tcgaaagtaatccttgggaa 761 |||||||||||| |||||| ||||||||||||| |||| |||||||||||||| Sbjct: 30337 cgcgcttcctttaatctttgaatagccgggtcaacttcacgaacgtaatccttgggaa 30394 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8195 Number of Sequences: 1807 Number of extensions: 8195 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 885 length of database: 10,358,551 effective HSP length: 16 effective length of query: 869 effective length of database: 10,329,639 effective search space: 8976456291 effective search space used: 8976456291 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)