BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZE09FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1674 884 0.0 >3x_Contig1674 Length = 12281 Score = 884 bits (446), Expect = 0.0 Identities = 477/484 (98%), Gaps = 3/484 (0%) Strand = Plus / Minus Query: 87 cttcatcctcaagaagcatagtttggaagtatctgagagtggtgatgaactagagaatga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9312 cttcatcctcaagaagcatagtttggaagtatctgagagtggtgatgaactagagaatga 9253 Query: 147 aacacccaagaaaaagaagggatgctgtggtggtaagaatggtggatgttccagtaagaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9252 aacacccaagaaaaagaagggatgctgtggtggtaagaatggtggatgttccagtaagaa 9193 Query: 207 actggacgaatttggcatgccagtgaagaagaacaagggatgctgtgggggtgcgtgtaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192 actggacgaatttggcatgccagtgaagaagaacaagggatgctgtgggggtgcgtgtaa 9133 Query: 267 atccaagaaggcgcaagatcctgcacctgtggtagaagttggttacgataacgaaataga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9132 atccaagaaggcgcaagatcctgcacctgtggtagaagttggttacgataacgaaataga 9073 Query: 327 tttcactgattcttttaaaaattgatatcaccatctttagttgttgtatcaatcaataag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9072 tttcactgattcttttaaaaattgatatcaccatctttagttgttgtatcaatcaataag 9013 Query: 387 gggaaggtggagcctcacatatttcgggggaaaaaaaagaggacgtgacgtctggccact 446 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9012 ggg-aggtggagcctcacatatttcgggggaaaaaaaagaggacgtgacgtctggccact 8954 Query: 447 tcaataattcggtaaaagcagtaatcttagaactcatattcaaaattcagggacacatag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8953 tcaataattcggtaaaagcagtaatcttagaactcatattcaaaattcagggacacatag 8894 Query: 507 ggtactttcaatattgnncttatttaatttgtaaactaataaattgncatttcattttta 566 |||||||||||||||| ||||||| |||||| ||||||| ||||| ||||||||||||| Sbjct: 8893 ggtactttcaatattg-tcttattt-atttgttaactaattaattgtcatttcattttta 8836 Query: 567 atta 570 |||| Sbjct: 8835 atta 8832 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 24,037 Number of Sequences: 1807 Number of extensions: 24037 Number of successful extensions: 521 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)