BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC44ZE09FM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1674                                                         884   0.0  

>3x_Contig1674 
          Length = 12281

 Score =  884 bits (446), Expect = 0.0
 Identities = 477/484 (98%), Gaps = 3/484 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   cttcatcctcaagaagcatagtttggaagtatctgagagtggtgatgaactagagaatga 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9312 cttcatcctcaagaagcatagtttggaagtatctgagagtggtgatgaactagagaatga 9253

                                                                        
Query: 147  aacacccaagaaaaagaagggatgctgtggtggtaagaatggtggatgttccagtaagaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9252 aacacccaagaaaaagaagggatgctgtggtggtaagaatggtggatgttccagtaagaa 9193

                                                                        
Query: 207  actggacgaatttggcatgccagtgaagaagaacaagggatgctgtgggggtgcgtgtaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192 actggacgaatttggcatgccagtgaagaagaacaagggatgctgtgggggtgcgtgtaa 9133

                                                                        
Query: 267  atccaagaaggcgcaagatcctgcacctgtggtagaagttggttacgataacgaaataga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9132 atccaagaaggcgcaagatcctgcacctgtggtagaagttggttacgataacgaaataga 9073

                                                                        
Query: 327  tttcactgattcttttaaaaattgatatcaccatctttagttgttgtatcaatcaataag 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9072 tttcactgattcttttaaaaattgatatcaccatctttagttgttgtatcaatcaataag 9013

                                                                        
Query: 387  gggaaggtggagcctcacatatttcgggggaaaaaaaagaggacgtgacgtctggccact 446
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9012 ggg-aggtggagcctcacatatttcgggggaaaaaaaagaggacgtgacgtctggccact 8954

                                                                        
Query: 447  tcaataattcggtaaaagcagtaatcttagaactcatattcaaaattcagggacacatag 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8953 tcaataattcggtaaaagcagtaatcttagaactcatattcaaaattcagggacacatag 8894

                                                                        
Query: 507  ggtactttcaatattgnncttatttaatttgtaaactaataaattgncatttcattttta 566
            ||||||||||||||||  ||||||| |||||| ||||||| ||||| |||||||||||||
Sbjct: 8893 ggtactttcaatattg-tcttattt-atttgttaactaattaattgtcatttcattttta 8836

                
Query: 567  atta 570
            ||||
Sbjct: 8835 atta 8832


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,037
Number of Sequences: 1807
Number of extensions: 24037
Number of successful extensions: 521
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)