BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZE10RM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1489 1342 0.0 >3x_Contig1489 Length = 10722 Score = 1342 bits (677), Expect = 0.0 Identities = 814/845 (96%), Gaps = 11/845 (1%) Strand = Plus / Minus Query: 48 ggcggtacctaagctagacgtttctgccaacaggatttacaggagcaagaaaagcaaacg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2307 ggcggtacctaagctagacgtttctgccaacaggatttacaggagcaagaaaagcaaacg 2248 Query: 108 ttctagaaagcaaatcaaagcacaagaatatgaaatcgccttatttcttggaagatatag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2247 ttctagaaagcaaatcaaagcacaagaatatgaaatcgccttatttcttggaagatatag 2188 Query: 168 aagactgttgaaatctttgcaaaagcacaaattgagtgaagaacatttagaatactttag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2187 aagactgttgaaatctttgcaaaagcacaaattgagtgaagaacatttagaatactttag 2128 Query: 228 ggatacaaacgctagctttgaacagtttgaaaccgtcaccacagaagtattagagggtca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2127 ggatacaaacgctagctttgaacagtttgaaaccgtcaccacagaagtattagagggtca 2068 Query: 288 agtaaactcacgttctctggttgaagtcaaatctgactatgagatgttttctggccctca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2067 agtaaactcacgttctctggttgaagtcaaatctgactatgagatgttttctggccctca 2008 Query: 348 agctgccagtaagaacatcatatcgcccataggacaaataattgatctttcaagaaactt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2007 agctgccagtaagaacatcatatcgcccataggacaaataattgatctttcaagaaactt 1948 Query: 408 tgctagagatgaaaactttgggacgtatttggatctctcagaacaattcaagaagtggtt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1947 tgctagagatgaaaactttgggacgtatttggatctctcagaacaattcaagaagtggtt 1888 Query: 468 gaatatcatcaagcgtgcggatttaacgatactttcatttttgaagatgttagaatcatt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1887 gaatatcatcaagcgtgcggatttaacgatactttcatttttgaagatgttagaatcatt 1828 Query: 528 tgaaacatacgactacttactcaacccatcattagatagagacaccaaggaatataacca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 tgaaacatacgactacttactcaacccatcattagatagagacaccaaggaatataacca 1768 Query: 588 attagtcactgagttactgaaatattataaggcctattactccaaagcttatcctctagt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 attagtcactgagttactgaaatattataaggcctattactccaaagcttatcctctagt 1708 Query: 648 ggacaaggaaa-tctttcc-aaaccattcacaatggatttgat-aatatgtgaagaaccg 704 ||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| || | | Sbjct: 1707 ggacaaggaaattctttccaaaaccatccacaatggatttgataaatatgtgaggaccgg 1648 Query: 705 tatcacagaatccccatcaaagg-aagcggggaaatgtacttcggtggtgtttaatcgat 763 |||||||||||||||||| |||| ||||||| |||||||| || || ||||||||||||| Sbjct: 1647 tatcacagaatccccatcgaaggaaagcgggaaaatgtac-tccgttgtgtttaatcgat 1589 Query: 764 ggttggatagtccagtc-gaatttaatact-atggtccaaaggaacagtttaatattgga 821 |||| |||||| ||||| |||||||||||| ||| || || |||||||||||||||| | Sbjct: 1588 ggtttgatagt-cagtcggaatttaatactcatgttcaaactgaacagtttaatattgca 1530 Query: 822 ttgtctcgaaattaaaagactttgatgaagaaat-cacgtttcactggtttttccaaatt 880 |||||||| ||| |||| |||||||||| ||| |||| |||||| ||||||||||||| Sbjct: 1529 ttgtctcggaatagaaagcgtttgatgaaggaatacacg-ttcact-gtttttccaaatt 1472 Query: 881 tctct 885 ||||| Sbjct: 1471 tctct 1467 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7722 Number of Sequences: 1807 Number of extensions: 7722 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)