BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZE11RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1435 1235 0.0 >3x_Contig1435 Length = 8899 Score = 1235 bits (623), Expect = 0.0 Identities = 665/675 (98%), Gaps = 3/675 (0%) Strand = Plus / Plus Query: 41 gcttgggcaacttgcaattccaattcagttggagcttgggacaaaatcttggcttgtggg 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6122 gcttgggcaacttgcaattccaattcagttggagcttgggacaaaatcttggcttgtggg 6181 Query: 101 tcagacatcgtggcttatgtttccttgcttggttatatcaagaactcctctaatggaaaa 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6182 tcagacatcgtggcttatgtttccttgcttggttatatcaagaactcctctaatggaaaa 6241 Query: 161 aaatcgctaaaacagtgctgcaactaatattcaactaacgctaatttattgtatataact 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6242 aaatcgctaaaacagtgctgcaactaatattcaactaacgctaatttattgtatataact 6301 Query: 221 attagacctcatttcaattgtttaaacagtaaaccttcaattctgaaaaagttgctgaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6302 attagacctcatttcaattgtttaaacagtaaaccttcaattctgaaaaagttgctgaga 6361 Query: 281 ctgggatgcattacgatgaatgaaacctactactggcctggtctggatagctcgtagaat 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6362 ctgggatgcattacgatgaatgaaacctactactggcctggtctggatagctcgtagaat 6421 Query: 341 ttgccggtccatacttccacacagtaggtagagagagtagcgagcctagacagtcgacac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6422 ttgccggtccatacttccacacagtaggtagagagagtagcgagcctagacagtcgacac 6481 Query: 401 ggcctagctgggttccttcctacacccggaacaggaccaaacggtaggtggaaaggtcca 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6482 ggcctagctgggttccttcctacacccggaacaggaccaaacggtaggtggaaaggtcca 6541 Query: 461 ttggaggccctgcctaacctgttagggtctctcagacctgactggtgatcgaaagacatg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6542 ttggaggccctgcctaacctgttagggtctctcagacctgactggtgatcgaaagacatg 6601 Query: 521 ccgtggctacgatggaaggacacttcgttacgaatgtgggaagcggtggctattctcaaa 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6602 ccgtggctacgatggaaggacacttcgttacgaatgtgggaagcggtggctattctcaaa 6661 Query: 581 a-gaaaaatacaacgccataatacctaaaaaagggaaggtgaatatatctagaaaaatga 639 | |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 6662 atgaaaaatacaacgccataatacct-aaaaagggagggtgaatatatctagaaaaatga 6720 Query: 640 aagactttcgttgtgtacagatgccaagaccgtaaaaatatgattggatgtaacagttcc 699 ||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||| ||| Sbjct: 6721 aagactttcgtggtgtacagatgcaaagacggtaaaaatatgtatggatgtaacag-tcc 6779 Query: 700 caagttattacttct 714 || |||||||||||| Sbjct: 6780 caggttattacttct 6794 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,792 Number of Sequences: 1807 Number of extensions: 12792 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)