BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZF03RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1412 1411 0.0 >3x_Contig1412 Length = 7639 Score = 1411 bits (712), Expect = 0.0 Identities = 801/824 (97%), Gaps = 6/824 (0%) Strand = Plus / Minus Query: 48 cgaaatcatccctttagttccttaacaaggttgacataacgattgtattcttcttcattc 107 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4519 cgaaatcatcc-tttagttccttaacaaggttgacataacgattgtattcttcttcattc 4461 Query: 108 atgccactattgtacgtttcatcggtagttatcgactcatatgcatatactacaaaagaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4460 atgccactattgtacgtttcatcggtagttatcgactcatatgcatatactacaaaagaa 4401 Query: 168 tgtagttctctgacgttagtataccagaaagcaccatgttcaatcataacatcgggcttt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4400 tgtagttctctgacgttagtataccagaaagcaccatgttcaatcataacatcgggcttt 4341 Query: 228 aaattagagattatcttttgtatggcatctaaaacttcagctaagaaagtttcactttgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4340 aaattagagattatcttttgtatggcatctaaaacttcagctaagaaagtttcactttgc 4281 Query: 288 gaggttaaacccaatctccacatatcacttagaataataataagaacccttgatggatac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4280 gaggttaaacccaatctccacatatcacttagaataataataagaacccttgatggatac 4221 Query: 348 aaaacttcttttcttgtcaagttcacagagacaccagttggaggaactttgccacccttc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4220 aaaacttcttttcttgtcaagttcacagagacaccagttggaggaactttgccacccttc 4161 Query: 408 aagagtccctcgatgatttcagtattgagggatctcgaatcttcgaacattttgtatagc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4160 aagagtccctcgatgatttcagtattgagggatctcgaatcttcgaacattttgtatagc 4101 Query: 468 tcatcattaatttgagacattaacgctgaaacatcttcagtattgaagttattgtttatg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4100 tcatcattaatttgagacattaacgctgaaacatcttcagtattgaagttattgtttatg 4041 Query: 528 gaaacaacattcaattgttttggagaagagccatcattcaaagtactatttgccgagaag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4040 gaaacaacattcaattgttttggagaagagccatcattcaaagtactatttgccgagaag 3981 Query: 588 cgcctgttttttaccggagtagcgttgatgcctcctcctacatatacaccagagcgcata 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3980 cgcctgttttttaccggagtagcgttgatgcctcctcctacatatacaccagagcgcata 3921 Query: 648 gaggactgtaaacgtgcaacttcctccttt-aagaaaaaacttctttntntaaatcggcg 706 |||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||| Sbjct: 3920 gaggactgtaaacgtgcaacttcctcctttaaagaaaaaacttctttttttagatcggcg 3861 Query: 707 ttttctgattgagatgttagaagctcatctcttgcggattttaattctttcaaatgggat 766 |||||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||| Sbjct: 3860 ttttctgattgagatgttagaagctcatctctcgcggatgttaattcttccaaagtggat 3801 Query: 767 gcaatttcatcttttcagttctttctgcttgtttgaaaatttcgtcaacttttgcctttt 826 |||||||||||||| ||||| ||||||||| |||| || ||||||||||| |||| ||| Sbjct: 3800 gcaatttcatctttcaagttc-ttctgcttg-ttgagaagttcgtcaacttctgcc-ttt 3744 Query: 827 gcananatgaattcttcttttgcagcaaatcaatgggtcgttaa 870 ||| | |||| ||||||||||||||| ||||||| ||||||||| Sbjct: 3743 gcagagatgatttcttcttttgcagc-aatcaattggtcgttaa 3701 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7645 Number of Sequences: 1807 Number of extensions: 7645 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)