BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZF08FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1793 765 0.0 >3x_Contig1793 Length = 40499 Score = 765 bits (386), Expect = 0.0 Identities = 445/462 (96%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 87 tagaacagcggacagtgcttattaaacctactttcattcgctgttgggctgcagaacaat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4156 tagaacagcggacagtgcttattaaacctactttcattcgctgttgggctgcagaacaat 4215 Query: 147 tattgggtgaggaccattttagccttgtatacaatttttgcttttttatattttcattca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4216 tattgggtgaggaccattttagccttgtatacaatttttgcttttttatattttcattca 4275 Query: 207 taaaatctatagaaaaaacttataataatgttaaacgattatctcccccatatatcttcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4276 taaaatctatagaaaaaacttataataatgttaaacgattatctcccccatatatcttcg 4335 Query: 267 aagtgtcaaaagaatgttctttatcttcgctgagatttggtgtaagtgaagttcctgac- 325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4336 aagtgtcaaaagaatgttctttatcttcgctgagatttggtgtaagtgaagttcctgaca 4395 Query: 326 acatgcgcaatacagataagtaatattgtagttatgtattaagcacatagaagtaaaggg 385 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4396 acatgcgcaatacagataagtaatattgtagttatgtattaagcacatagaagtaaaagg 4455 Query: 386 t-acgaagttacaaattgtatcgttttgtattgagtgatgtagttgagtgaccttttgaa 444 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4456 taacgaagttacaaattgtatcgttttgtattgagtgatgtagttgagtgacctttgaag 4515 Query: 445 taggttctgcaaccagagaaggaacttaagagacaactgaactttgttgaacgtaaaagt 504 ||||||||||| | ||||| |||||| |||||||||||| |||||||||||||||||||| Sbjct: 4516 taggttctgcagcgagagagggaactaaagagacaactggactttgttgaacgtaaaagt 4575 Query: 505 ggtatggctttttttcggcccgaagtggtgggtgggaaattt 546 |||||||||| ||| ||||| |||||||| |||| |||||| Sbjct: 4576 ggtatggcttctttccggccgaaagtggtgcgtggaaaattt 4617 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9161 Number of Sequences: 1807 Number of extensions: 9161 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)