BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZG01RM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 1612 0.0 >3x_Contig1666 Length = 16162 Score = 1612 bits (813), Expect = 0.0 Identities = 864/877 (98%), Gaps = 4/877 (0%) Strand = Plus / Plus Query: 48 taatttttcaaaattttcagcttgtaagaagaagggacacctgtgcacctcataataaat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7768 taatttttcaaaattttcagcttgtaagaagaagggacacctgtgcacctcataataaat 7827 Query: 108 gtaaaagaagctataacatacataaggcagtctataatttaatcatgctaattattcaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7828 gtaaaagaagctataacatacataaggcagtctataatttaatcatgctaattattcaga 7887 Query: 168 tgcagtggatccactcaatgagtccatatcctgaccattttatctttcccaccgctacat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7888 tgcagtggatccactcaatgagtccatatcctgaccattttatctttcccaccgctacat 7947 Query: 228 acacgtttaccgtctacagaccaatctacagtgtagacttcatcttgatgaccgggtaga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7948 acacgtttaccgtctacagaccaatctacagtgtagacttcatcttgatgaccgggtaga 8007 Query: 288 tcgacggacagttttctagttttgacatcccagacttttaaagtggtatctttggaacaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8008 tcgacggacagttttctagttttgacatcccagacttttaaagtggtatctttggaacaa 8067 Query: 348 gaaacgagtagtctacagtcgcttgaccaagctacttggtagacactcgctacatgtcct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8068 gaaacgagtagtctacagtcgcttgaccaagctacttggtagacactcgctacatgtcct 8127 Query: 408 ctaaaggtggataggaatttaccatcccttccatcccataatttaatggagttgtcaaag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8128 ctaaaggtggataggaatttaccatcccttccatcccataatttaatggagttgtcaaag 8187 Query: 468 gatgcagaaacaatgtaacggccatctggcgaaaatgcaacgtggttgacgagcttttgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8188 gatgcagaaacaatgtaacggccatctggcgaaaatgcaacgtggttgacgagcttttgg 8247 Query: 528 tggccggtcattctggtaataggtttagtagacttcaaggggttccacagatacatagta 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8248 tggccggtcattctggtaataggtttagtagacttcaaggggttccacagatacatagta 8307 Query: 588 aaatcgtcactggcagttaccatcagttcttcgaagtcaccttttcttttagcaactttt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8308 aaatcgtcactggcagttaccatcagttcttcgaagtcaccttttcttttagcaactttt 8367 Query: 648 tcgtaatttttcagagccttctgttgggcttcttcaggtgaagcangaggttcgcccttg 707 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 8368 tcgtaatttttcagagccttctgttgggcttcttcaggtgaagcaggagtttcgcccttg 8427 Query: 708 tgatcgaacgcaccgagtcttaatgcataatctgttgaaagtgaaagatgattaacccaa 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8428 tgatcgaacgcaccgagtcttaatgcataatctgttgaaagtgaaagatgattaacccaa 8487 Query: 768 tgggcgtgtgattntaggatattgatacatttaccgntcaaaatcatgtnccagcatctg 827 ||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 8488 tgggcgtgtgattttaggatattgatacatttaccgttcaaattcatgtcccagcatctg 8547 Query: 828 attgtttttatcgtgaggaccactgtatagaacattttttccaccccactttgacaca-g 886 |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| | Sbjct: 8548 attg-ttttatcgtgagaaccactgtatagaacattttttccaccccac-ttgacacagg 8605 Query: 887 aaacagnaaaacgtttggccacataaggttaaaaggc 923 |||||| || |||| |||||||||||||||||||||| Sbjct: 8606 aaacag-aagacgtatggccacataaggttaaaaggc 8641 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5281 Number of Sequences: 1807 Number of extensions: 5281 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)