BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZG07RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1358 0.0 >3x_Contig1770 Length = 29267 Score = 1358 bits (685), Expect = 0.0 Identities = 748/763 (98%), Gaps = 5/763 (0%) Strand = Plus / Minus Query: 48 acatcgttcgattcctattaactccagattatcatcggtgaggaattatatctcaatcgg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19119 acatcgttcgattcctattaactccagattatcatcggtgaggaattatatctcaatcgg 19060 Query: 108 atgtgctaataaaacgggcagcaggcttcttcgttccgcaggggtatcaagtcagtacaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19059 atgtgctaataaaacgggcagcaggcttcttcgttccgcaggggtatcaagtcagtacaa 19000 Query: 168 agatttcaggaggtttaacagttccagtaatggtaatggtaccgacaagaatgcttctgt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18999 agatttcaggaggtttaacagttccagtaatggtaatggtaccgacaagaatgcttctgt 18940 Query: 228 tgcaccgaaaactgaggtcaagaagattgttcccccaaaaccatcaactaatggtaaatc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18939 tgcaccgaaaactgaggtcaagaagattgttcccccaaaaccatcaactaatggtaaatc 18880 Query: 288 aaagactccgaccatttcggaattgcgtattatgaaagatctatttaagtatatctggcc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18879 aaagactccgaccatttcggaattgcgtattatgaaagatctatttaagtatatctggcc 18820 Query: 348 cagcggtgataacaaggtcaaaattagagtgttaattgcattggcgctattgataggtgc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18819 cagcggtgataacaaggtcaaaattagagtgttaattgcattggcgctattgataggtgc 18760 Query: 408 caagttgttgaatgttcaagttccttttttcttcaaacagaccatcgattcgatgaatat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18759 caagttgttgaatgttcaagttccttttttcttcaaacagaccatcgattcgatgaatat 18700 Query: 468 tgaatggggtccagatgtggctactgtgctcccagttgcgataacaatgactattctctc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18699 tgaatggggtccagatgtggctactgtgctcccagttgcgataacaatgactattctctc 18640 Query: 528 gtacggtgctgctagattcggtgctgttatgtttggtgagttgaggaacgcagttttcgc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18639 gtacggtgctgctagattcggtgctgttatgtttggtgagttgaggaacgcagttttcgc 18580 Query: 588 taaggtggcccanaacgctatcaagaaagtctcattacanacgttccaacatttaatgaa 647 |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 18579 taaggtggcccaaaacgctatcaggaaagtctcattacaaacgttccaacatttaatgaa 18520 Query: 648 gttagatctgggatggcatctaagtagacaaactggtgggttgactcgtgccatgggata 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 18519 gttagatctgggatggcatctaagtagacaaactggtgggttgactcgtgccat-ggata 18461 Query: 708 ga-gtacccaaggtatctcatatgttctcagtgctatggttttccatatgaattccatcc 766 || ||||| | ||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 18460 gaggtaccaagggtatctcatatgttctcagtgctatggttttccatatg-attccaatc 18402 Query: 767 acgtttgaaatattcctgggtttgtggtatttttgacgtacca 809 |||||||||||| ||| ||||||||||| | ||||||||||| Sbjct: 18401 acgtttgaaata-tccgtggtttgtggta-tcttgacgtacca 18361 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5858 Number of Sequences: 1807 Number of extensions: 5858 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)