BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC44ZH12FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig598 827 0.0 >3x_Contig598 Length = 2989 Score = 827 bits (417), Expect = 0.0 Identities = 485/501 (96%), Gaps = 5/501 (0%) Strand = Plus / Plus Query: 86 ctttgtttgggaatctttggttgtaaatagccaaaatgtttaaccatgccatgatggccc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1790 ctttgtttgggaatctttggttgtaaatagccaaaatgtttaaccatgccatgatggccc 1849 Query: 146 atacaccatccttctctctaacgtggttagatccggtaccgaatgattcttcaccacaga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1850 atacaccatccttctctctaacgtggttagatccggtaccgaatgattcttcaccacaga 1909 Query: 206 ttgaaagtttctttgcatcgaacaaggcacagaaaaacttccaaccggtaggaacctcat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1910 ttgaaagtttctttgcatcgaacaaggcacagaaaaacttccaaccggtaggaacctcat 1969 Query: 266 aacagttcaaaccttgttccttagcgactctatcaatggcagaagacgttgggaacgaac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1970 aacagttcaaaccttgttccttagcgactctatcaatggcagaagacgttgggaacgaac 2029 Query: 326 gagctaaaccgtaaattccttg-tttcttgaaataagggatagcagaagcgtactcggca 384 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2030 gagctaaaccgtaaattccttgctttcttgaaataagggatagcagaagcgtactcggca 2089 Query: 385 atgatggcaacagaatcacctggcgagacaaatgctggaccagcaccatagatcatattt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 atgatggcaacagaatcacctggcgagacaaatgctggaccagcaccatagatcatattt 2149 Query: 445 ctatcaccgtcaccattcgaaggcagcaccggaattgaattccgtacttgtcgactctct 504 ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 2150 ctatcaccgtcacca-tcggaggcagcacc-gaattgaattccgtacttgtcgactctct 2207 Query: 505 ccacttaagtggggggcttagttaaattagggtcagggtgcaacccacccaaattttgtt 564 ||||| ||||| ||| | ||| |||||||||||||||||||| ||||| ||| | || | Sbjct: 2208 ccactaaagtgtgggcgtaagtcaaattagggtcagggtgcaa-ccaccgaaa-tctggt 2265 Query: 565 tttggaaggtagttttgcaaa 585 |||||| |||||||||||||| Sbjct: 2266 tttggatggtagttttgcaaa 2286 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8702 Number of Sequences: 1807 Number of extensions: 8702 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)