BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZB03FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1582 1118 0.0 >3x_Contig1582 Length = 14087 Score = 1118 bits (564), Expect = 0.0 Identities = 669/699 (95%), Gaps = 4/699 (0%) Strand = Plus / Plus Query: 86 agtttccaaattttcgtttgtatagttggtgataaaccagatgtagttacaactgcctag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13006 agtttccaaattttcgtttgtatagttggtgataaaccagatgtagttacaactgcctag 13065 Query: 146 atcagatgtaaatatggtatcgatatcttgccatgaggaaattatggcacccaactcatt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13066 atcagatgtaaatatggtatcgatatcttgccatgaggaaattatggcacccaactcatt 13125 Query: 206 cttacttgtttttttgataagattgttgtcactgtcataacgtaacatgtcgcatacgca 265 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13126 cttacttgtttccttgataagattgttgtcactgtcataacgtaacatgtcgcatacgca 13185 Query: 266 tctcatcaatatatccctaaactcttctctctcctggacaatcgaaacgaattcttccat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13186 tctcatcaatatatccctaaactcttctctctcctggacaatcgaaacgaattcttccat 13245 Query: 326 gaccatattcaaaaacttgttattcgtatcttcacctccgttcgagactttaatggccaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13246 gaccatattcaaaaacttgttattcgtatcttcacctccgttcgagactttaatggccaa 13305 Query: 386 ttgtgagatggattggatagctttggtcacgaattcatgatcaaagtcctttgcatattc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13306 ttgtgagatggattggatagctttggtcacgaattcatgatcaaagtcctttgcatattc 13365 Query: 446 ttttaattcgttgaaaagcatctggcaatgtttcaaattatccacgggcactaatctgag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13366 ttttaattcgttgaaaagcatctggcaatgtttcaaattatccacgggcactaatctgag 13425 Query: 506 caagatgtctaatttctctatcttcacgtacaatggatcattaaatttgacatagaatat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13426 caagatgtctaatttctctatcttcacgtacaatggatcattaaatttgacatagaatat 13485 Query: 566 tcttaactcttttcttaacaagtttgggaaagcatccaaattaatntttata-ttctcaa 624 |||||||||||| ||||||||||||||||| ||||||||| |||| ||||| ||||||| Sbjct: 13486 tcttaactctttccttaacaagtttgggaaggcatccaaaataattcttatatttctcaa 13545 Query: 625 agc-acatattggattctcactggggtcgactttaatgagaccaatgccgttgataactt 683 ||| ||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||| Sbjct: 13546 agcaacatattggatctccactggggtcgacattagtgagaccaatgcagttgataactt 13605 Query: 684 gttgtatatagaatcatggactggtttcaaatttggtagagttttaaatttccatttaac 743 |||||||||||| |||||||||| ||||||||||||||| | | | | | |||||||| Sbjct: 13606 gttgtatatagagtcatggactgtgttcaaatttggtagatgtatgagtatacatttaac 13665 Query: 744 -cttgtcaagacccctgatggatttaccgtgttgcaaat 781 || |||||||| |||||||||||| |||||||||||| Sbjct: 13666 actgatcaagaccactgatggattta-cgtgttgcaaat 13703 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7442 Number of Sequences: 1807 Number of extensions: 7442 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)