BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZB12RM1.SCF screened BAC_end
         (917 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1661                                                        1249   0.0  

>3x_Contig1661 
          Length = 14612

 Score = 1249 bits (630), Expect = 0.0
 Identities = 694/709 (97%), Gaps = 5/709 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   gcttgattcctcattctctgtatctacattatttgaaagaagtttcccccaacggttccc 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7749 gcttgattcctcattctctgtatctacattatttgaaagaagtttcccccaacggttccc 7690

                                                                        
Query: 104  tctatttggaacatgaggtagttctgctgatgcagaagaggcagttgacagaggtgccgc 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7689 tctatttggaacatgaggtagttctgctgatgcagaagaggcagttgacagaggtgccgc 7630

                                                                        
Query: 164  aatatcaacaggagcgggtttctctagcaaaggatcctcgtttcctctttcctttgtaat 223
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7629 aatatcaacaggagcgggtttctctagcaaaggatcctcgtttcctctttcctttggaat 7570

                                                                        
Query: 224  tatttgtagtgcaaagtcagatttagaacccttgggacaagaaatacaccaattaacgtc 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7569 tatttgtagtgcaaagtcagatttagaacccttgggacaagaaatacaccaattaacgtc 7510

                                                                        
Query: 284  attaaagtagatgttcatggaagtcttattaggtttcattgctctttggaagagttcaat 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7509 attaaagtagatgttcatggaagtcttattaggtttcattgctctttggaagagttcaat 7450

                                                                        
Query: 344  gacaaaacttggagttaggatgggaatatgatgagcttgcttaacgaattcaattttccg 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7449 gacaaaacttggagttaggatgggaatatgatgagcttgcttaacgaattcaattttccg 7390

                                                                        
Query: 404  tttcattgaatttctaaacatttgagcttgatttacagagatcttcatatccaaatctgt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7389 tttcattgaatttctaaacatttgagcttgatttacagagatcttcatatccaaatctgt 7330

                                                                        
Query: 464  cctgaacattgacgcgtacttattttgccttaaagtatgttcctgtggtattgaagtcaa 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7329 cctgaacattgacgcgtacttattttgccttaaagtatgttcctgtggtattgaagtcaa 7270

                                                                        
Query: 524  ttgggagatgttaacgagtaagaaatccgtcttcttcgtcaatttctcatgatgggcaaa 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7269 ttgggagatgttaacgagtaagaaatccgtcttcttcgtcaatttctcatgatggtcaaa 7210

                                                                        
Query: 584  accaatcaacttcaaaaagtctat-attttattgatgtgtagtaatttcacgcc-tggaa 641
            |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||
Sbjct: 7209 accaatcaacttcaaaaagtctataattttattgatgtgtagtaattccacgccatggaa 7150

                                                                        
Query: 642  ccctgtgatatgaaaggaaagtttagggccatgttacaccgatttagttggaatgatatt 701
            |||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 7149 ccctgtgatatggaaggaaagtttagggccatgtaacaccgatttaggtggaatgatatt 7090

                                                             
Query: 702  gaaaatcgttgttnaaaaggttttaacc-aaaatccggaggttggagtt 749
            | ||||||||| |  ||||||||| ||| ||||||||||||| ||||||
Sbjct: 7089 g-aaatcgttg-tagaaaggttttgaccaaaaatccggaggtaggagtt 7043


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7598
Number of Sequences: 1807
Number of extensions: 7598
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)