BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZC06FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1544 892 0.0 >3x_Contig1544 Length = 10626 Score = 892 bits (450), Expect = 0.0 Identities = 493/502 (98%), Gaps = 4/502 (0%) Strand = Plus / Plus Query: 87 attgtgtttagttttctatgaatgttagttagatatgtcagacttgtgttacaattagtt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2710 attgtgtttagttttctatgaatgttagttagatatgtcagacttgtgttacaattagtt 2769 Query: 147 tagagatgtatttgaattgattgatgttatgaagagattagtgtaataagaacagagaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2770 tagagatgtatttgaattgattgatgttatgaagagattagtgtaataagaacagagaaa 2829 Query: 207 gaatttagaattattaaggtaaaaacaggcagatatgggattaccaaaatgaagtgaaat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2830 gaatttagaattattaaggtaaaaacaggcagatatgggattaccaaaatgaagtgaaat 2889 Query: 267 gggtaaagagaaaaaaaggcattgtcatttactcgctttgagactctacgtcagtctcca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2890 gggtaaagagaaaaaaaggcattgtcatttactcgctttgagactctacgtcagtctcca 2949 Query: 327 cgtcagtttgcacctccgaatgcaaactcagtttgacgggttttcgtcagtttttggcga 386 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 2950 cgtcagtttgcacctccgaatgcaaactcagtttgacggg-tttcgtcag-ttttggcga 3007 Query: 387 gcccagggaagggcgaggaccctgtttagagtcactatcatcgcttggattactagttct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3008 gcccagggaagggcgaggaccctgtttagagtcactatcatcgcttggattactagttct 3067 Query: 447 atcttgattagtagtagtaatatcagaagcacttatcgtagcagcagacgtagaattatt 506 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3068 atctgaatcagtagtagtaatatcagaagcacttatcgtagcagcagacgtagaattatt 3127 Query: 507 gttaacgggagggggtgtttggtggggggcaacgccaggtcaaagctttccgaaggtctt 566 ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 3128 gttaacgggagggggtg-ttggt-gggggcaacgccaggtcaaagcttcccgaaggtctt 3185 Query: 567 cttttgtgtggtgatgaaaggg 588 || ||||||||||||||||||| Sbjct: 3186 ctcttgtgtggtgatgaaaggg 3207 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,818 Number of Sequences: 1807 Number of extensions: 12818 Number of successful extensions: 105 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)