BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZC08FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1596 1326 0.0 >3x_Contig1596 Length = 11686 Score = 1326 bits (669), Expect = 0.0 Identities = 727/741 (98%), Gaps = 4/741 (0%) Strand = Plus / Plus Query: 89 actataccagtacttgagcttaggagtaagctgaataaggaactaggtatacttgcttag 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 actataccagtacttgagcttaggagtaagctgaataaggaactaggtatacttgcttag 557 Query: 149 ccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccggcttgctt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccggcttgctt 617 Query: 209 aatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgggggagcg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 aatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgggggagcg 677 Query: 269 tcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtagtgcggcc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 tcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtagtgcggcc 737 Query: 329 ggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgcaccggca 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 ggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgcaccggca 797 Query: 389 gcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaatatttgaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 gcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaatatttgaat 857 Query: 449 aagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtactttgacg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 aagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtactttgacg 917 Query: 509 cctccaaataaaaacgctgctgcttct-acacaatccctgcctcgtctgcatcagccact 567 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 918 cctccaaataaaaacgctgctgcttctaacacaatccctgcctcgtctgcatcagccact 977 Query: 568 gcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcccttgaaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 gcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcccttgaaa 1037 Query: 628 agagataacaacggccatttgataaaaccgcaacaggtgacacccttgcactattttaga 687 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 agagataacaacggccaattgataaaaccgcaacaggtgacacccttgcactattttaga 1097 Query: 688 gcttacttcaatgttgaaaaattggatcgattcgtctttagaa-tgtacaaacctgagct 746 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1098 gcttac-tcaatgttgaaaaattggatcgattcgtctttagaattgtacaaacctgagct 1156 Query: 747 atcacgtatcatttacccgattttattttacgtttttttaccagtggtcatcagggaccc 806 |||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| Sbjct: 1157 atcacgtatcatatacccgattttcatttacgtttttttacagttggtcatcaaggaccc 1216 Query: 807 tttac-agcaagaagattctt 826 |||| ||| ||||||||||| Sbjct: 1217 cttacaagcgagaagattctt 1237 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,578 Number of Sequences: 1807 Number of extensions: 10578 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)