BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZC10RM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1426 1362 0.0 >3x_Contig1426 Length = 8319 Score = 1362 bits (687), Expect = 0.0 Identities = 731/739 (98%), Gaps = 5/739 (0%) Strand = Plus / Plus Query: 56 cttcatggagagaacaacaatgaactatactatttgtttggagtagtgttaggtcttgca 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1776 cttcatggagagaacaacaatgaactatactatttgtttggagtagtgttaggtcttgca 1835 Query: 116 atatataacagtactatattggacttacattttgcgagggccatgtacaagaaactatgc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1836 atatataacagtactatattggacttacattttgcgagggccatgtacaagaaactatgc 1895 Query: 176 aatgagcggatcacttttgaagattatgaggagttgtaccctgagacagcaagaaattta 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1896 aatgagcggatcacttttgaagattatgaggagttgtaccctgagacagcaagaaattta 1955 Query: 236 aagaaaatgttgagttattcggaactagattttagtgatatatttggattgtcgtttgag 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1956 aagaaaatgttgagttattcggaactagattttagtgatatatttggattgtcgtttgag 2015 Query: 296 accacgtattacgatgtagccagtggtatcaacgtcacgaaaccgttatgtgacggagga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2016 accacgtattacgatgtagccagtggtatcaacgtcacgaaaccgttatgtgacggagga 2075 Query: 356 gaatcaatcccagtaacctcggagaataagacagagtttgttgaaaggtgggtaaatttt 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2076 gaatcaatcccagtaacctcggagaataagacagagtttgttgaaaggtgggtaaatttt 2135 Query: 416 tatatgaatgagggggtctcatcgagttttagtgcattccaatccgggtttacaagagtc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2136 tatatgaatgagggggtctcatcgagttttagtgcattccaatccgggtttacaagagtc 2195 Query: 476 atcggggatggtttggctttcccgatgttcaaaagttgtgaagtagaaaggctcatctgt 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 atcggggatggtttggctttcccgatgttcaaaagttgtgaagtagaaaggctcatctgt 2255 Query: 536 ggcagcatagaacaagacatggatttcgaacaacttcgcgctgtgacgaaataccaaggc 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2256 ggcagcatagaacaagacatggatttcgaacaacttcgcgctgtgacgaaataccaaggc 2315 Query: 596 ggattccataaccaaaccccggtagtggaatggctatgggaaatactaccacaattatcc 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2316 ggattccataaccaaaccccggtagtggaatggctatgggaaatactaccacaattatcc 2375 Query: 656 catgaacagcaacgtcaatttctccatttcgtgactgggagtgacaga-tttcagtgacg 714 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 2376 catgaacagcaacgtcaatttctccatttcgtgactgggagtgacagagttccagtgacg 2435 Query: 715 ggacttgcgacgctttcgttcaaagtaacccgcacaacgtccggaatcacattgatcaag 774 ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||| || Sbjct: 2436 ggacttgcgacgcttccgttcaaggtaacccgcacaacgtccgg-atcaca-tgatc-ag 2492 Query: 775 ttgcccactggcccatacc 793 ||||||||| ||||||||| Sbjct: 2493 ttgcccact-gcccatacc 2510 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5802 Number of Sequences: 1807 Number of extensions: 5802 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)