BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZC11FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1009 1219 0.0 >3x_Contig1009 Length = 4650 Score = 1219 bits (615), Expect = 0.0 Identities = 720/742 (97%), Gaps = 10/742 (1%) Strand = Plus / Minus Query: 89 tctcttgaatatcgtactggcaatcatctcgtaataggtgtatatgtatatagtttgagt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1600 tctcttgaatatcgtactggcaatcatctcgtaataggtgtatatgtatatagtttgagt 1541 Query: 149 tttatgtttgtgtttaacctcgtgacaatacacatacatatatttaaatcctaatataaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1540 tttatgtttgtgtttaacctcgtgacaatacacatacatatatttaaatcctaatataaa 1481 Query: 209 atatactctatcacaagaaccgaatcttcaactattcacatttcatacttcttatatata 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 atatactctatcacaagaaccgaatcttcaactattcacatttcatacttcttatatata 1421 Query: 269 aaactagaaccgaaaaccatcttagtgtaacgatactaacactctgtgtgcatattaatc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 aaactagaaccgaaaaccatcttagtgtaacgatactaacactctgtgtgcatattaatc 1361 Query: 329 tcgggctaaacgaagcataaaaaagtcaaaccaaaaacagttaaaatgctaaagataacg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1360 tcgggctaaacgaagcataaaaaagtcaaaccaaaaacagttaaaatgctaaagataacg 1301 Query: 389 aggtaactgtcagaaagtcagtctgagacagctgttctaacctgatttccagttttaagg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1300 aggtaactgtcagaaagtcagtctgagacagctgttctaacctgatttccagttttaagg 1241 Query: 449 tacattacagtacaatgcagatactcagctaggcgaattttttttattttgagaattttt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1240 tacattacagtacaatgcagatactcagctaggcgaattttttttattttgagaattttt 1181 Query: 509 tgttggctttttcttttgcatcttagaaacgtgtgtaggactgagagttttgtgcgaaat 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1180 tgttggctttttcttttgcatcttagaaacgtgtgtaggactgagagttttgtgcgaaat 1121 Query: 569 cttgagtgtgtggactgagaaacggtgaaat-aatgtggtctgactaagtgtcattgtg- 626 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1120 cttgagtgtgtggactgagaaacggtgaaataaatgtggtctgactaagtgtcattgtga 1061 Query: 627 acgacgccgacacatagggctgtgcc-ggggcctgttacctttttcacacagtagtaat- 684 |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1060 acgacgccgacacatagggctgtgccgggggcctgtacccttttccacacagtagtaata 1001 Query: 685 ataataaacattagcttcgnggatgtttaaacggcat-aactgttaactatttggtatgc 743 ||||||||||||||||||| ||||||| |||||||| |||||| ||||| |||||||| Sbjct: 1000 ataataaacattagcttcggtgatgttt-aacggcataaactgtaaacta-ttggtatg- 944 Query: 744 ccggtccgtatgtattgcatttttgcaacacgttaacttgggaaggaccttaattgattt 803 |||||||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||| Sbjct: 943 ccggtccgtatgtagtgcatttttgcaacacgtaaac-tgggaaggagctaaattgattt 885 Query: 804 ttttaattggatttttcaaatt 825 ||| |||| ||||| ||||||| Sbjct: 884 tttaaatt-gatttctcaaatt 864 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7483 Number of Sequences: 1807 Number of extensions: 7483 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)