BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZC12RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1454 1522 0.0 >3x_Contig1454 Length = 9243 Score = 1522 bits (768), Expect = 0.0 Identities = 867/894 (96%), Gaps = 6/894 (0%) Strand = Plus / Minus Query: 44 gcttcgacgatttgagagatcgttgtgattttgaaagagtgattaacaaaaactctttgg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2683 gcttcgacgatttgagagatcgttgtgattttgaaagagtgattaacaaaaactctttgg 2624 Query: 104 cagattgtccgaatgaactacctataaatatagattggattaccaagaagcaagctcagt 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2623 cagattgtccgaatgaactacctataaatatagattggattaccaagaagcaagctcagt 2564 Query: 164 taaaattggagaagagacagttcatgcgtatcttagaaatgttccttctatatcaaaagt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2563 taaaattggagaagagacagttcatgcgtatcttagaaatgttccttctatatcaaaagt 2504 Query: 224 ctcctaactatagattacaattaaaaaagagaatttatgaaaagaattttgaggctctta 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2503 ctcctaactatagattacaattaaaaaagagaatttatgaaaagaattttgaggctctta 2444 Query: 284 tggatatggatgagagcctgaagaaagataaattacaaacggctttccaatccctaaccg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2443 tggatatggatgagagcctgaagaaagataaattacaaacggctttccaatccctaaccg 2384 Query: 344 aagattacaatcgtattctctctaaagtagctatcagaaaaaggacattttctgactcgc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2383 aagattacaatcgtattctctctaaagtagctatcagaaaaaggacattttctgactcgc 2324 Query: 404 aaggtgaatctgacaaaagactcaaagcataaaacgtcgtaatgtcttctttggatggtt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2323 aaggtgaatctgacaaaagactcaaagcataaaacgtcgtaatgtcttctttggatggtt 2264 Query: 464 cacttgtcaaacaagctggtaactaagacttattacttcaacttcatgaattgtcaaatt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2263 cacttgtcaaacaagctggtaactaagacttattacttcaacttcatgaattgtcaaatt 2204 Query: 524 aacatgcgagaattcttttctcatttagataaatagaaatcaaagatagttagtcctttt 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2203 aacatgcgagaattcttttctcatttagataaatagaaatcaaagatagttagtcctttt 2144 Query: 584 tggattatcttgagtttcgaccacgatgtcgtggattactagcgccttagcggcaagaat 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2143 tggattatcttgagtttcgaccacgatgtcgtggattactagcgccttagcggcaagaat 2084 Query: 644 tgtctactgctattttactttaagagctttcttcattataagaagaataagttaggcctg 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2083 tgtctactgctattttactttaagagctttcttcattataagaagaataagttaggcctg 2024 Query: 704 atattgantaaccaaatctgtactactgggtatgttataaccgcgattaaatttgaaaat 763 ||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 2023 atattgataaaccaaatctgtactactggtaatgtattaaccgcgattaaattgaaaaat 1964 Query: 764 agncagttttgagaatatggtactgtctcttatttgaaca-gatactgtgaagtagtgac 822 || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1963 agcaagttttgagaatatggtactgtctctta-ttgaacaggatactgtgaagtagtgac 1905 Query: 823 attaggggacttggtctanagggatagtgatgtaaaaantgatgatggacattttcgatc 882 |||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||| Sbjct: 1904 atta-gggacttggtctagagggatagtgatgtaaaagttgatgatggaca-tttcgatc 1847 Query: 883 ttctggaacgggtntttctgtacttccttnaacaataacctgggaatttaatta 936 | || || ||||| ||||||||||| | | || |||||||||| ||||||||| Sbjct: 1846 tcct-gatcgggtttttctgtactttc-tggacgataacctggggatttaatta 1795 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7263 Number of Sequences: 1807 Number of extensions: 7263 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)