BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZC12RM1.SCF screened BAC_end
         (942 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1454                                                        1522   0.0  

>3x_Contig1454 
          Length = 9243

 Score = 1522 bits (768), Expect = 0.0
 Identities = 867/894 (96%), Gaps = 6/894 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   gcttcgacgatttgagagatcgttgtgattttgaaagagtgattaacaaaaactctttgg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2683 gcttcgacgatttgagagatcgttgtgattttgaaagagtgattaacaaaaactctttgg 2624

                                                                        
Query: 104  cagattgtccgaatgaactacctataaatatagattggattaccaagaagcaagctcagt 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2623 cagattgtccgaatgaactacctataaatatagattggattaccaagaagcaagctcagt 2564

                                                                        
Query: 164  taaaattggagaagagacagttcatgcgtatcttagaaatgttccttctatatcaaaagt 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2563 taaaattggagaagagacagttcatgcgtatcttagaaatgttccttctatatcaaaagt 2504

                                                                        
Query: 224  ctcctaactatagattacaattaaaaaagagaatttatgaaaagaattttgaggctctta 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 ctcctaactatagattacaattaaaaaagagaatttatgaaaagaattttgaggctctta 2444

                                                                        
Query: 284  tggatatggatgagagcctgaagaaagataaattacaaacggctttccaatccctaaccg 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 tggatatggatgagagcctgaagaaagataaattacaaacggctttccaatccctaaccg 2384

                                                                        
Query: 344  aagattacaatcgtattctctctaaagtagctatcagaaaaaggacattttctgactcgc 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 aagattacaatcgtattctctctaaagtagctatcagaaaaaggacattttctgactcgc 2324

                                                                        
Query: 404  aaggtgaatctgacaaaagactcaaagcataaaacgtcgtaatgtcttctttggatggtt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 aaggtgaatctgacaaaagactcaaagcataaaacgtcgtaatgtcttctttggatggtt 2264

                                                                        
Query: 464  cacttgtcaaacaagctggtaactaagacttattacttcaacttcatgaattgtcaaatt 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 cacttgtcaaacaagctggtaactaagacttattacttcaacttcatgaattgtcaaatt 2204

                                                                        
Query: 524  aacatgcgagaattcttttctcatttagataaatagaaatcaaagatagttagtcctttt 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 aacatgcgagaattcttttctcatttagataaatagaaatcaaagatagttagtcctttt 2144

                                                                        
Query: 584  tggattatcttgagtttcgaccacgatgtcgtggattactagcgccttagcggcaagaat 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 tggattatcttgagtttcgaccacgatgtcgtggattactagcgccttagcggcaagaat 2084

                                                                        
Query: 644  tgtctactgctattttactttaagagctttcttcattataagaagaataagttaggcctg 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 tgtctactgctattttactttaagagctttcttcattataagaagaataagttaggcctg 2024

                                                                        
Query: 704  atattgantaaccaaatctgtactactgggtatgttataaccgcgattaaatttgaaaat 763
            |||||||  ||||||||||||||||||||  ||||  ||||||||||||||||  |||||
Sbjct: 2023 atattgataaaccaaatctgtactactggtaatgtattaaccgcgattaaattgaaaaat 1964

                                                                        
Query: 764  agncagttttgagaatatggtactgtctcttatttgaaca-gatactgtgaagtagtgac 822
            ||  |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 1963 agcaagttttgagaatatggtactgtctctta-ttgaacaggatactgtgaagtagtgac 1905

                                                                        
Query: 823  attaggggacttggtctanagggatagtgatgtaaaaantgatgatggacattttcgatc 882
            |||| ||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||
Sbjct: 1904 atta-gggacttggtctagagggatagtgatgtaaaagttgatgatggaca-tttcgatc 1847

                                                                  
Query: 883  ttctggaacgggtntttctgtacttccttnaacaataacctgggaatttaatta 936
            | || || ||||| ||||||||||| | |  || |||||||||| |||||||||
Sbjct: 1846 tcct-gatcgggtttttctgtactttc-tggacgataacctggggatttaatta 1795


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7263
Number of Sequences: 1807
Number of extensions: 7263
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)