BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZD07RM1.SCF screened BAC_end
         (897 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1737                                                        1457   0.0  

>3x_Contig1737 
          Length = 17214

 Score = 1457 bits (735), Expect = 0.0
 Identities = 818/839 (97%), Gaps = 6/839 (0%)
 Strand = Plus / Minus

                                                                        
Query: 49   tgccaaagtagcgtcaccatccaagtgttggagcaattgtttgtacaacaattgggtcca 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7677 tgccaaagtagcgtcaccatccaagtgttggagcaattgtttgtacaacaattgggtcca 7618

                                                                        
Query: 109  gatagcacctgacacagctgatccaacagctgagccgattctgtacatggtgtaactcaa 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7617 gatagcacctgacacagctgatccaacagctgagccgattctgtacatggtgtaactcaa 7558

                                                                        
Query: 169  tgcggtgacagtggccatgttttcatgagaagtgacggattggagggacacggtgactgg 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7557 tgcggtgacagtggccatgttttcatgagaagtgacggattggagggacacggtgactgg 7498

                                                                        
Query: 229  gtaagtgaacatggtggtaccgagaccccaaacgactagcgcaccgatgatacctttatc 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7497 gtaagtgaacatggtggtaccgagaccccaaacgactagcgcaccgatgatacctttatc 7438

                                                                        
Query: 289  agaattttgaccggatctgaaatggaacaagatacccattgcgaccatccatagggaaca 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7437 agaattttgaccggatctgaaatggaacaagatacccattgcgaccatccatagggaaca 7378

                                                                        
Query: 349  accagcgatgatgaatggctttaatctggtgaatctagtgatgaatagcgcaaagaaagg 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7377 accagcgatgatgaatggctttaatctggtgaatctagtgatgaatagcgcaaagaaagg 7318

                                                                        
Query: 409  cgaaaatacggtggaagtgaaggtactgacactggaaattctggtggcagaagtgacact 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7317 cgaaaatacggtggaagtgaaggtactgacactggaaattctggtggcagaagtgacact 7258

                                                                        
Query: 469  ttcattcacagcaaccatcaagattgtgtacaagtaacctgcggccatggtgaagatgaa 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7257 ttcattcacagcaaccatcaagattgtgtacaagtaacctgcggccatggtgaagatgaa 7198

                                                                        
Query: 529  gttgatcaagaaggcaatacacaaagcagcccaaataccacggtctctcaacaacttgaa 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7197 gttgatcaagaaggcaatacacaaagcagcccaaataccacggtctctcaacaacttgaa 7138

                                                                        
Query: 589  tggagcaattggttcacgagcccatttggattcccatgcgatanagaatgggatcaagac 648
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7137 tggagcaattggttcacgagcccatttggattcccatgcgataaagaatgggatcaagac 7078

                                                                        
Query: 649  gaaacctaagatgaatggagcantgatatgtggattgttccatttgtttgagataccacc 708
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7077 gaaacctaagatgaatggagcaatgatatgtggattgttccatttgtttgagataccacc 7018

                                                                        
Query: 709  tgctagagtcaatgggaccaaagatacacccaa-gattattatcatgaagaaaacaccaa 767
            ||||||||||||||||||| |||||||| |||| ||| || |||||||||||||||||||
Sbjct: 7017 tgctagagtcaatgggacc-aagatacaaccaaggataataatcatgaagaaaacaccaa 6959

                                                                        
Query: 768  tgacgtncaattttccaaaacaattgaaccanactttgtaccagcccatgttgtttggta 827
            |||||| ||| |||||||||||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 6958 tgacgtccaa-tttccaaaacaattgaaccagactttgtacgagcccatg-tgtttggta 6901

                                                                       
Query: 828  gtaaagttttttgaaaggacaattcttttcaagccctcggttggcctacctctccattt 886
            || |||| |||||| |||||||||| |||| || |||||||| | ||| ||||||||||
Sbjct: 6900 gt-aagtcttttgagaggacaattc-tttccaggcctcggtttgtctagctctccattt 6844


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5813
Number of Sequences: 1807
Number of extensions: 5813
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)