BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZD11RM1.SCF screened BAC_end (976 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1451 1384 0.0 >3x_Contig1451 Length = 8346 Score = 1384 bits (698), Expect = 0.0 Identities = 793/811 (97%), Gaps = 11/811 (1%) Strand = Plus / Minus Query: 52 atagccccaaaggcttcaggactctggacttgagaatatatacctcaacaagagttggag 111 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3592 atagccccaaatgcttcaggactctggacttgagaatatatacctcaacaagagttggag 3533 Query: 112 tgtggttcattgctttgtcagcatatgcattagcctgctcgaactgctttctatgcaaat 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3532 tgtggttcattgctttgtcagcatatgcattagcctgctcgaactgctttctatgcaaat 3473 Query: 172 aatgtagagccaaaaagtaagttgtccaaacaaattggattggttgatcagtcgatgata 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3472 aatgtagagccaaaaagtaagttgtccaaacaaattggattggttgatcagtcgatgata 3413 Query: 232 gctcagcataataaggtaatacaatactttcaacaatatccggaataccttccttcttgt 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3412 gctcagcataataaggtaatacaatactttcaacaatatccggaataccttccttcttgt 3353 Query: 292 aaagaggtttgatgttattgaatgtggctggaacaccgcgatttaactgcgttatgatat 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3352 aaagaggtttgatgttattgaatgtggctggaacaccgcgatttaactgcgttatgatat 3293 Query: 352 aatcattgagtttcgcggttaattctaccttatctttgaggaatgtgagcggaatgaatt 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3292 aatcattgagtttcgcggttaattctaccttatctttgaggaatgtgagcggaatgaatt 3233 Query: 412 taggaggctccgatttagggtaaaatatagccaacttttcatataaagctttcctcaact 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3232 taggaggctccgatttagggtaaaatatagccaacttttcatataaagctttcctcaact 3173 Query: 472 tctcatttccttgaattccaagtgaaacttccaatagcctgtaatatctgaaattgtctg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3172 tctcatttccttgaattccaagtgaaacttccaatagcctgtaatatctgaaattgtctg 3113 Query: 532 gacttctcttaatcaaagttctgtacacaatagaggcttccttagaccgaccaagtttca 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3112 gacttctcttaatcaaagttctgtacacaatagaggcttccttagaccgaccaagtttca 3053 Query: 592 ttaaaatagaagctttcctctctaacc-gccatatctatcatanacatcgtcggaaatct 650 ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 3052 ttaaaatagaagctttcctctctaaccagccatatctatcataaacatcgtcggaaatct 2993 Query: 651 tttccaaatgctctaaaactctttccaaggattctttatcgntgcctgccttcttgtac- 709 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2992 tttccaaatgctctaaaactctttccaaggattctttatcgttgcctgccttcttgtaca 2933 Query: 710 aaagatcattcttgtacatgatacattncgttgntctcatacattttctgggtca-ccca 768 ||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| |||| Sbjct: 2932 aaagatcattcttgtacatgatacatt-cgttgttctcataca-tttctggttcacccca 2875 Query: 769 acttgccttcaagcaagctctttaaatgtcgaaaagagtatttgattgcgtcttgcgtaa 828 |||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| | Sbjct: 2874 acttgccttc-agcaagctcttcaaatgtcg-aaagagta-ttgattgcgtcttgcgt-a 2819 Query: 829 cccccattcaaaatcttgtgcttatggccaa 859 | ||||||| ||||||||||| ||||||||| Sbjct: 2818 cgcccattc-aaatcttgtgc-tatggccaa 2790 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7476 Number of Sequences: 1807 Number of extensions: 7476 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 976 length of database: 10,358,551 effective HSP length: 16 effective length of query: 960 effective length of database: 10,329,639 effective search space: 9916453440 effective search space used: 9916453440 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)