BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZE01FM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1637 731 0.0 >3x_Contig1637 Length = 14855 Score = 731 bits (369), Expect = 0.0 Identities = 447/469 (95%), Gaps = 3/469 (0%) Strand = Plus / Plus Query: 290 agcccgtctccactctaatattcgaatcgtgaaaaaccgttgattttgacccctctcttc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcccgtctccactctaatattcgaatcgtgaaaaaccgttgattttgacccctctcttc 63 Query: 350 caaatcgaaaaaaagtaagcagcggagaaaataagacactctctcattgaaagaattcaa 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 caaatcgaaaaaaagtaagcagcggagaaaataagacactctctcattgaaagaattcaa 123 Query: 410 ttgttcaaacctgttttcacatacacatatataaaggattgtgtgttcacaattggtgca 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ttgttcaaacctgttttcacatacacatatataaaggattgtgtgttcacaattggtgca 183 Query: 470 acttggtgggctagatggcatcttcgatcagtgctgcaaaaactgacaattgtggtactg 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 acttggtgggctagatggcatcttcgatcagtgctgcaaaaactgacaattgtggtactg 243 Query: 530 ataatatagcaactggacggtcgatgggtcaaggattggttgcgggagaggagatagat- 588 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 244 ataatatagcaactggacggtcgatgggtcaaggattggttgcggaggaggagatagata 303 Query: 589 aagtactcaagcaggatgtccgagatgcagtgacaagcacagctggcacggcaagctgtc 648 |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 304 aagtactcaagcaggatgtcggagatgcagtgacagcaacagctggcacggc-agctgtc 362 Query: 649 gctgccgtaacgtctggttctgtcactgtaagttcgggcgtgaccttccggttgtagttt 708 ||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||| Sbjct: 363 gctgccgtagcgtctggttctgtcactgtcagttcgggcgtgaac-tccggttgtagttc 421 Query: 709 tagaatccgcgctttagattgggaagtttctttgacccgacatggactt 757 |||| | ||||| |||| | ||||| ||||| || ||||||||||||| Sbjct: 422 tagatccggcgctatagacttggaaggttcttcgagccgacatggactt 470 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5643 Number of Sequences: 1807 Number of extensions: 5643 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)