BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZE01RM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1513 1612 0.0 >3x_Contig1513 Length = 11967 Score = 1612 bits (813), Expect = 0.0 Identities = 848/856 (99%), Gaps = 3/856 (0%) Strand = Plus / Minus Query: 46 tactactgtttgttgtcaaatctattaagtctagagcaccggtacctctagacgcaacag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10306 tactactgtttgttgtcaaatctattaagtctagagcaccggtacctctagacgcaacag 10247 Query: 106 cgtaacgttcatttgcatctaaatggttcactgcattcaaatatgatagtttattgctgg 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10246 cgtaacgttcatttgcatctaaatggttcactgcattcaaatatgatagtttattgctgg 10187 Query: 166 atttcgttgagttcgcttcaggtaactcaatagttacggttttttcgtcttcatcctctt 225 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10186 atttcgttgagttcgcttcaggtaactcaatagttacggttttttcgtcgtcatcctctt 10127 Query: 226 caaggtcaattctaactatttcatcagattgtgaacacattattaacctagaatcatcaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10126 caaggtcaattctaactatttcatcagattgtgaacacattattaacctagaatcatcaa 10067 Query: 286 tgaacttagcaaatttgcaaccagttctcaacaaaaactcattgtccaactttgttactt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10066 tgaacttagcaaatttgcaaccagttctcaacaaaaactcattgtccaactttgttactt 10007 Query: 346 tcaatttgttgtctgttggttgtaaatggaaaactttggtagtatttagtcttcccacta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10006 tcaatttgttgtctgttggttgtaaatggaaaactttggtagtatttagtcttcccacta 9947 Query: 406 ataaaacttgtccgtcagttgatagtgcacaggtttggatgttttgttcatccttcaaaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9946 ataaaacttgtccgtcagttgatagtgcacaggtttggatgttttgttcatccttcaaaa 9887 Query: 466 ccaatttactaactaatttgtagttcttaggctcattgacgtcttcgccaatataccata 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9886 ccaatttactaactaatttgtagttcttaggctcattgacgtcttcgccaatataccata 9827 Query: 526 tcttcacgatattatcctgccacatcaccaatagtctttgttgtttgttgaccaggatgc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9826 tcttcacgatattatcctgccacatcaccaatagtctttgttgtttgttgaccaggatgc 9767 Query: 586 tcttatggaatggggtaactagtggcatctttctataatttccttcagcgaaagaggaca 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9766 tcttatggaatggggtaactagtggcatctttctataatttccttcagcgaaagaggaca 9707 Query: 646 ttgagcacatgacaagagacttttcaataccaccagacactangaagtcggatcccatac 705 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9706 ttgagcacatgacaagagacttttcaataccaccagacactaggaagtcggatcccatac 9647 Query: 706 attgataagaggacatagatctaacatcattgggatggaataatctgtttgaagtactga 765 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9646 attgataagaggacatagatctaacatcattggaatggaataatctgtttgaagtactga 9587 Query: 766 tccatttcatgctctttcctgtatcgatgtaagagaattggaaaat-tttctatc-acac 823 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 9586 tccatttcatgctctttcctgtatcgatgtaagagaattggaaaatctttctatcaacac 9527 Query: 824 cactagtgaaccattgtgaattatccagatcagtagccagacatagaacatcggcatcat 883 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9526 cactagtgaacaattgtgaattatccagatcagtagccagacatagaacatcggcatcat 9467 Query: 884 gaaaccttgaaggatt 899 | ||||||||| |||| Sbjct: 9466 g-aaccttgaaagatt 9452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6922 Number of Sequences: 1807 Number of extensions: 6922 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)