BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZE07RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1314 1211 0.0 >3x_Contig1314 Length = 6289 Score = 1211 bits (611), Expect = 0.0 Identities = 706/722 (97%), Gaps = 13/722 (1%) Strand = Plus / Plus Query: 46 tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3278 tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 3337 Query: 106 tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3338 tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 3397 Query: 166 tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3398 tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 3457 Query: 226 cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3458 cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 3517 Query: 286 atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3518 atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 3577 Query: 346 ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3578 ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 3637 Query: 406 gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3638 gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 3697 Query: 466 ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3698 ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 3757 Query: 526 acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttgga- 584 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3758 acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttggat 3817 Query: 585 tataatgaccttcacacatttttagctttcacaacttgaacgatttctgaaagagatgnc 644 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 3818 tataatgaccttcacacatttttagcttccacaacttgaacgatttctgaaggagatg-c 3876 Query: 645 ttttgattgacattttttcgttctgttgaaagcattgcgtttaaacctctcgtggtttcg 704 |||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||| Sbjct: 3877 ttttgattgaca-tttttcgttctgttg-aagcattgcgtt--aacctctcgt-gtttcg 3931 Query: 705 ctttttatgtttggcaaaggttattattccaggaaaaagttattcagcaattctgcgatt 764 | |||||||||| ||||||| ||||| |||| |||||||||| ||||||| ||||||||| Sbjct: 3932 c-ttttatgttt-gcaaagg-tatta-tccaagaaaaagtta-tcagcaa-tctgcgatt 3985 Query: 765 tt 766 || Sbjct: 3986 tt 3987 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9096 Number of Sequences: 1807 Number of extensions: 9096 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)