BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZE10FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1439 1179 0.0 >3x_Contig1439 Length = 7662 Score = 1179 bits (595), Expect = 0.0 Identities = 637/647 (98%), Gaps = 3/647 (0%) Strand = Plus / Plus Query: 86 attcaaaagttgcagttggtgactaagtcttctgagaaagaaggcgaaagggattcagac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4565 attcaaaagttgcagttggtgactaagtcttctgagaaagaaggcgaaagggattcagac 4624 Query: 146 agagatgtacttggtgagagaagagaacaaggaggatcacatggaccgttaaggacaccc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4625 agagatgtacttggtgagagaagagaacaaggaggatcacatggaccgttaaggacaccc 4684 Query: 206 ttgactgcaacatcagtatcattcacggttcccgagcatcaggataaagtcattgcgcat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 ttgactgcaacatcagtatcattcacggttcccgagcatcaggataaagtcattgcgcat 4744 Query: 266 aggctttctatttccacaagaccctcatcgaccaaattgggcactccaaccacagtagcc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4745 aggctttctatttccacaagaccctcatcgaccaaattgggcactccaaccacagtagcc 4804 Query: 326 tcttctagcgaagctcctcccaccatcacaccagtgaattctatcagttccacaactcgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4805 tcttctagcgaagctcctcccaccatcacaccagtgaattctatcagttccacaactcgt 4864 Query: 386 gaaccggacacgggtcatgttaccaacacgtcaacggcggctactaatactgccaatact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4865 gaaccggacacgggtcatgttaccaacacgtcaacggcggctactaatactgccaatact 4924 Query: 446 tcttgagctggatcatctcgtcagaactctgtgcacatacctggtgatttcatctatttc 505 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4925 tctggagctggatcatctcgtcagaactctgtgcacatacctggtgatttcatctatttc 4984 Query: 506 gaagctaaaccaaataaccggacgcgccacggtggtgatggcgcagtgtcccct-aaatg 564 |||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 4985 gaagctaaaccaaataacgggacgcgcaacggtggtgatggcgcagtgtcccctaaaatg 5044 Query: 565 acaggtgtcctggaccgtgaactatcaccctctgccacgtctcttgattattatgacccc 624 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5045 acaggtgtcctggaccgtgaactatcaccctctgccacgtctcttgattataatgacccc 5104 Query: 625 atcgctggcgtcgccgccaagaaggctactaccaagaaacgaattagtgaagaaggaacc 684 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 5105 atcgctgccgtcgccgccaagaaggctactaccaagaaacgaatcagtgaag-aggaacc 5163 Query: 685 acacgttccttttaccgaaattgtttcaaaaaaaggatgatgaaaaa 731 ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 5164 acacgttccttttaccg-aattgtttcaaaaagaggatgatgaaaaa 5209 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6393 Number of Sequences: 1807 Number of extensions: 6393 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)