BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZF01RM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1738                                                        1626   0.0  

>3x_Contig1738 
          Length = 21411

 Score = 1626 bits (820), Expect = 0.0
 Identities = 861/871 (98%), Gaps = 3/871 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    aacggaggagaaaacgtcactaaagcacaacaatggcacatattggcgaaaaagatgaat 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9148  aacggaggagaaaacgtcactaaagcacaacaatggcacatattggcgaaaaagatgaat 9207

                                                                         
Query: 108   atacaaggaccaaatgctggagaagaattggcaaagacgtactacagatatttactaccg 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9208  atacaaggaccaaatgctggagaagaattggcaaagacgtactacagatatttactaccg 9267

                                                                         
Query: 168   tacgaaaagtacttgatgaccccagaaggtattaaagaaactcaaaccaatcgtatcatg 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268  tacgaaaagtacttgatgaccccagaaggtattaaagaaactcaaaccaatcgtatcatg 9327

                                                                         
Query: 228   ttacagcaattacttcaggacattataagaaacattagaacgaatacaccgcagttccaa 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328  ttacagcaattacttcaggacattataagaaacattagaacgaatacaccgcagttccaa 9387

                                                                         
Query: 288   ccgcaggtgcaaaatcagtcttttatgcagggtcaaaacgtaatacaaccggatttacaa 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9388  ccgcaggtgcaaaatcagtcttttatgcagggtcaaaacgtaatacaaccggatttacaa 9447

                                                                         
Query: 348   atgaagcaacaacagattcctaaggctcaaggcaaaacaaagaacaccgtcccaaaacaa 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9448  atgaagcaacaacagattcctaaggctcaaggcaaaacaaagaacaccgtcccaaaacaa 9507

                                                                         
Query: 408   gcaaaacctaaacagcctaagaagccaagagtgaagaagaagactaagaaagaactagaa 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9508  gcaaaacctaaacagcctaagaagccaagagtgaagaagaagactaagaaagaactagaa 9567

                                                                         
Query: 468   caggaaagaaaacaaatggaagagctgcaaaagcgtcaacaacaagaagcggagcaacaa 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9568  caggaaagaaaacaaatggaagagctgcaaaagcgtcaacaacaagaagcggagcaacaa 9627

                                                                         
Query: 528   cagcagcagcaaaagctcatattcgaacaacaattgaagaaacaacaggaaattattttg 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9628  cagcagcagcaaaagctcatattcgaacaacaattgaagaaacaacaggaaattattttg 9687

                                                                         
Query: 588   aaacgtcgtgaagagcaaattaagaagcttccgaaggtgtataagagaacgatggccagg 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9688  aaacgtcgtgaagagcaaattaagaagcttccgaaggtgtataagagaacgatggccagg 9747

                                                                         
Query: 648   cattatagtcccaccacaagagccatcaccacgcaaaatgggtatgatatttcaaagatt 707
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9748  cattatagtcccaccacaagagccatcaccacgcaaaatgggtatgatatttcaaagatt 9807

                                                                         
Query: 708   tcagctcttggtgagatgatacataattttaaacccatcttcctctttgcgccgngagtt 767
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||
Sbjct: 9808  tcagctcttggtgagatgatacataattttaaacccatcttcctctttgcgccggagttt 9867

                                                                         
Query: 768   ggtgtcgtcaatatcaatgcaattgcaatgcagttacaaagttctaataacccggaagtc 827
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9868  ggtgtcgtcaatatcaatgcaattgcaatgcagttacaaagttctaataacccggaagtc 9927

                                                                         
Query: 828   aataccgcactaaactcattattaggtattagctttcgat-acactttatcaattccact 886
             ||||||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||
Sbjct: 9928  aataccgcactaaactcattattagttattagc-tccgataacactttatcaattccact 9986

                                            
Query: 887   cgataaaagtcgtgaagcttttggataacct 917
             ||||||| |||||| ||||||||||||||||
Sbjct: 9987  cgataaatgtcgtg-agcttttggataacct 10016


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8359
Number of Sequences: 1807
Number of extensions: 8359
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)