BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZF01RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1738 1626 0.0 >3x_Contig1738 Length = 21411 Score = 1626 bits (820), Expect = 0.0 Identities = 861/871 (98%), Gaps = 3/871 (0%) Strand = Plus / Plus Query: 48 aacggaggagaaaacgtcactaaagcacaacaatggcacatattggcgaaaaagatgaat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9148 aacggaggagaaaacgtcactaaagcacaacaatggcacatattggcgaaaaagatgaat 9207 Query: 108 atacaaggaccaaatgctggagaagaattggcaaagacgtactacagatatttactaccg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9208 atacaaggaccaaatgctggagaagaattggcaaagacgtactacagatatttactaccg 9267 Query: 168 tacgaaaagtacttgatgaccccagaaggtattaaagaaactcaaaccaatcgtatcatg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268 tacgaaaagtacttgatgaccccagaaggtattaaagaaactcaaaccaatcgtatcatg 9327 Query: 228 ttacagcaattacttcaggacattataagaaacattagaacgaatacaccgcagttccaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9328 ttacagcaattacttcaggacattataagaaacattagaacgaatacaccgcagttccaa 9387 Query: 288 ccgcaggtgcaaaatcagtcttttatgcagggtcaaaacgtaatacaaccggatttacaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9388 ccgcaggtgcaaaatcagtcttttatgcagggtcaaaacgtaatacaaccggatttacaa 9447 Query: 348 atgaagcaacaacagattcctaaggctcaaggcaaaacaaagaacaccgtcccaaaacaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9448 atgaagcaacaacagattcctaaggctcaaggcaaaacaaagaacaccgtcccaaaacaa 9507 Query: 408 gcaaaacctaaacagcctaagaagccaagagtgaagaagaagactaagaaagaactagaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9508 gcaaaacctaaacagcctaagaagccaagagtgaagaagaagactaagaaagaactagaa 9567 Query: 468 caggaaagaaaacaaatggaagagctgcaaaagcgtcaacaacaagaagcggagcaacaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9568 caggaaagaaaacaaatggaagagctgcaaaagcgtcaacaacaagaagcggagcaacaa 9627 Query: 528 cagcagcagcaaaagctcatattcgaacaacaattgaagaaacaacaggaaattattttg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9628 cagcagcagcaaaagctcatattcgaacaacaattgaagaaacaacaggaaattattttg 9687 Query: 588 aaacgtcgtgaagagcaaattaagaagcttccgaaggtgtataagagaacgatggccagg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9688 aaacgtcgtgaagagcaaattaagaagcttccgaaggtgtataagagaacgatggccagg 9747 Query: 648 cattatagtcccaccacaagagccatcaccacgcaaaatgggtatgatatttcaaagatt 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9748 cattatagtcccaccacaagagccatcaccacgcaaaatgggtatgatatttcaaagatt 9807 Query: 708 tcagctcttggtgagatgatacataattttaaacccatcttcctctttgcgccgngagtt 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9808 tcagctcttggtgagatgatacataattttaaacccatcttcctctttgcgccggagttt 9867 Query: 768 ggtgtcgtcaatatcaatgcaattgcaatgcagttacaaagttctaataacccggaagtc 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9868 ggtgtcgtcaatatcaatgcaattgcaatgcagttacaaagttctaataacccggaagtc 9927 Query: 828 aataccgcactaaactcattattaggtattagctttcgat-acactttatcaattccact 886 ||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||| Sbjct: 9928 aataccgcactaaactcattattagttattagc-tccgataacactttatcaattccact 9986 Query: 887 cgataaaagtcgtgaagcttttggataacct 917 ||||||| |||||| |||||||||||||||| Sbjct: 9987 cgataaatgtcgtg-agcttttggataacct 10016 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8359 Number of Sequences: 1807 Number of extensions: 8359 Number of successful extensions: 128 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)