BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZF07FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1145                                                        1413   0.0  

>3x_Contig1145 
          Length = 5226

 Score = 1413 bits (713), Expect = 0.0
 Identities = 804/831 (96%), Gaps = 3/831 (0%)
 Strand = Plus / Plus

                                                                        
Query: 91   tgtggcaggagaccaggattggagctttattcggccaagtctaggtgtagatctgtccat 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4274 tgtggcaggagaccaggattggagctttattcggccaagtctaggtgtagatctgtccat 4333

                                                                        
Query: 151  gtatatagtcaaaactcagtgatttttcaagattgtcaataataaaaggaaaataataac 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4334 gtatatagtcaaaactcagtgatttttcaagattgtcaataataaaaggaaaataataac 4393

                                                                        
Query: 211  aaactgaaatcttaaacaaagttcaccaaggcaggtacaattcgagctccccaagaaaca 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4394 aaactgaaatcttaaacaaagttcaccaaggcaggtacaattcgagctccccaagaaaca 4453

                                                                        
Query: 271  gaccgcactgaatcaggtaataccaatattatatcaaaattaaccaccaaaagcaaagag 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4454 gaccgcactgaatcaggtaataccaatattatatcaaaattaaccaccaaaagcaaagag 4513

                                                                        
Query: 331  gacaaaatggatccatttattcaggttttcaaggacacagaggaacaattgaaccaatta 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4514 gacaaaatggatccatttattcaggttttcaaggacacagaggaacaattgaaccaatta 4573

                                                                        
Query: 391  ttgcagatattagataggaagaagaaagggagatcgaacaccagttcgaaagagatctcg 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4574 ttgcagatattagataggaagaagaaagggagatcgaacaccagttcgaaagagatctcg 4633

                                                                        
Query: 451  gaaatcatctctgaggctcaagagactatccaagatctaaatgagagtatagaaatgatg 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4634 gaaatcatctctgaggctcaagagactatccaagatctaaatgagagtatagaaatgatg 4693

                                                                        
Query: 511  aaacaggaacaagctattcccgaatacgaaattcagacccgtgagaagtccatggcaaac 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4694 aaacaggaacaagctattcccgaatacgaaattcagacccgtgagaagtccatggcaaac 4753

                                                                        
Query: 571  ctggaatcaaaattgaaacaatgccagtcgttaaatatcgagacaacccgcgacaccgat 630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4754 ctggaatcaaaattgaaacaatgccagtcgttaaatatcgagacaacccgcgacaccgat 4813

                                                                        
Query: 631  gcagctacccaatcatcattgctgccgcagcaacaacagcgtggcgattccttcgatttg 690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4814 gcagctacccaatcatcattgctgccgcagcaacaacagcgtggcgattccttcgatttg 4873

                                                                        
Query: 691  nacatcgagggcactgcaagcaccgaccaatcagacgcggcanaccacgacgccgtacag 750
             |||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4874 gacatcgaggcaactgcaggcaccgaccaatcagacgcggcaaaccacgacgccgtacag 4933

                                                                        
Query: 751  gagcatttactccgtgaacaagaacatccattggacatgattcaccagaacatgcaaaac 810
            ||||| |||||||||||||||||  ||| ||||||||||||||||||||  |||||||||
Sbjct: 4934 gagcaattactccgtgaacaagacaatcaattggacatgattcaccagacaatgcaaaac 4993

                                                                        
Query: 811  tttattttacaggc-tttacaatgggtcaagaactaacag-acaaggcatgattctcgaa 868
             ||  | ||||||| | ||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 4994 attcatctacaggcatctacaatgggtcaagaactaacagaacagggcatgattctcgaa 5053

                                                               
Query: 869  -aaatggacggaaatttccacgggatcatgaaccaacttttcaaaggaaga 918
             |||||||||||||| || ||||  |||||||| |||||| || |||||||
Sbjct: 5054 gaaatggacggaaatgtcgacggagtcatgaacaaactttccagaggaaga 5104


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6737
Number of Sequences: 1807
Number of extensions: 6737
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)