BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZF09RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1588 912 0.0 >3x_Contig1588 Length = 14692 Score = 912 bits (460), Expect = 0.0 Identities = 579/608 (95%), Gaps = 8/608 (1%) Strand = Plus / Minus Query: 194 cttcttcaccaggtaagaggaatatgtagagattcaccttcgcaaccagcacgagcagta 253 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14589 cttcttcaccaggtaagaggaata-gtagagattcaccttcgcaaccagcacgagcagta 14531 Query: 254 cgcccgattctgtgtaaatggtcttctactgcaaacggtggatccatttctataacagta 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14530 cgcccgattctgtgtaaatggtcttctactgcaaacggtggatccatttctataacagta 14471 Query: 314 ctcacatggggtaaatcaagacctctggatgcaacatcggtacaaaataagatcagatgc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14470 ctcacatggggtaaatcaagacctctggatgcaacatcggtacaaaataagatcagatgc 14411 Query: 374 ttacccttggtggcatcgttattcgtggcgaagtgttttaaggttgcggttcttgtttgt 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14410 ttacccttggtggcatcgttattcgtggcgaagtgttttaaggttgcggttcttgtttgt 14351 Query: 434 tgcgataaggacccatgcaacttgtaacatatgacgtttggatcgtccgtgtcgttgaaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14350 tgcgataaggacccatgcaacttgtaacatatgacgtttggatcgtccgtgtcgttgaaa 14291 Query: 494 catggaagtatgctgctcccctttgtgagaagccttgcggtatctccaacgaggacctct 553 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14290 catggaagtatgctgttcccctttgtgagaagccttgcggtatctccaacga-gacctct 14232 Query: 554 atgattcccatcatgcgatgaaaacacttcgtagtggaaatctacactatcagcatcaga 613 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 14231 atgattcccatcatgcgatgaaaacacttcgtagtggaaatctacactatcagaacaaga 14172 Query: 614 tataaacacgatggttcttgttacgtctgattttgatccttctatataatgcttttgagt 673 || |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14171 taaaaacacaatggttcttgttacgtctgattttgatccttctttataatgcttttgagt 14112 Query: 674 tatagttgaaaaagatgcgggtcgagt-acttgcctttagctttggtggcactattgac- 731 |||||||| |||||| | | | |||| ||| ||| |||||||||||||||||| |||| Sbjct: 14111 tatagttgtcaaagatcccgctagagtaactagcc-ttagctttggtggcacta-tgaca 14054 Query: 732 atcttttgaaggaattgatctggaactgctggaagtttccg-tggtttttgaccactgtc 790 ||||||||||| ||||||||||| |||| | | |||||||| | |||||||||||||| Sbjct: 14053 atcttttgaagtaattgatctggtactg-tagtagtttccgtttgtttttgaccactgct 13995 Query: 791 aatcaatt 798 |||||||| Sbjct: 13994 aatcaatt 13987 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6707 Number of Sequences: 1807 Number of extensions: 6707 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)