BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZF11RM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1351 1511 0.0 >3x_Contig1351 Length = 9242 Score = 1511 bits (762), Expect = 0.0 Identities = 866/891 (97%), Gaps = 8/891 (0%) Strand = Plus / Minus Query: 49 aagggaagacacccatggaggagttagaaagactttcagctgctagagtacccaaaaaga 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8942 aagggaagacacccatggaggagttagaaagactttcagctgctagagtacccaaaaaga 8883 Query: 109 aagatttcatggacccaatcgaatcaatgttgcaggcaaagaaaaatatcgaaactgaag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8882 aagatttcatggacccaatcgaatcaatgttgcaggcaaagaaaaatatcgaaactgaag 8823 Query: 169 ttgtaaatgaagctggtgattcaagacctacaatacctatattattggagaagattaaac 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8822 ttgtaaatgaagctggtgattcaagacctacaatacctatattattggagaagattaaac 8763 Query: 229 attctagcatctataacgatcaaattaccaattcgtatatcataccagagagaatagcga 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8762 attctagcatctataacgatcaaattaccaattcgtatatcataccagagagaatagcga 8703 Query: 289 aatatggtgaattagaatttgcactctctccggaagtttatcaggcgcttgagtataaag 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8702 aatatggtgaattagaatttgcactctctccggaagtttatcaggcgcttgagtataaag 8643 Query: 349 acttctattctcaccaagctgcagcaataaactgcattcataagggagagaatgtcataa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8642 acttctattctcaccaagctgcagcaataaactgcattcataagggagagaatgtcataa 8583 Query: 409 tcacaacgtctacttcgtcgggaaaatctttaatctaccagttatctgcaatagacgcac 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8582 tcacaacgtctacttcgtcgggaaaatctttaatctaccagttatctgcaatagacgcac 8523 Query: 469 tactcaaggatccacactctacgttcatgtacatatttccgacaaaagctntagcacaag 528 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 8522 tactcaaggatccacactctacgttcatgtacatatttccgacaaaagctttagcacaag 8463 Query: 529 atcaaaagagatcatttcaaaagctattgtccaagataccagaattgtcacatgttattg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8462 atcaaaagagatcatttcaaaagctattgtccaagataccagaattgtcacatgttattg 8403 Query: 589 tagatacctatgatggagacacagagcaacaagcacgagcaggtattcggatttcggctc 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8402 tagatacctatgatggagacacagagcaacaagcacgagcaggtattcggatttcggctc 8343 Query: 649 gtgttattttcacgaatcctgatatgattcacacaagtattttacct-atcatcctaact 707 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 8342 gtgttattttcacgaatcctgatatgattcacacaagtattttacctaatcatcctaact 8283 Query: 708 ggaaaatgttttttgacaatctaagatatgtggtcgntgatgaattgcatatttataagg 767 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 8282 ggaaaatgtttttggacaatctaagatatgtggtcgttgatgaattgcatatttataa-g 8224 Query: 768 ggctttttcggtt-ccatgtgnctttagttatgagaagatagttccgaa-tgtgaaaggg 825 ||||||||||||| ||||||| |||||||||||||||||| |||||| |||| ||||| Sbjct: 8223 ggctttttcggttcccatgtggctttagttatgagaagattagtccgaattgtg-aaggg 8165 Query: 826 tttttattaaaatgaaaagcttacaattatatcatgtttctgctacactaaaacattcca 885 |||||| |||||||||||||| | |||||||||| ||||||||||||||||||| ||| Sbjct: 8164 gttttataaaaatgaaaagcttcaatttatatcatg-ttctgctacactaaaacatccca 8106 Query: 886 taacacatatgc-agacatatttcggtattgagcaattcacgttgtttaac 935 || |||||||| |||||| |||||||||||||||| |||||||| ||||| Sbjct: 8105 tacaacatatgcaagacat-tttcggtattgagcaagtcacgttgattaac 8056 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6627 Number of Sequences: 1807 Number of extensions: 6627 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)