BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZG07RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig834 1366 0.0 >3x_Contig834 Length = 2891 Score = 1366 bits (689), Expect = 0.0 Identities = 844/877 (96%), Gaps = 14/877 (1%) Strand = Plus / Plus Query: 39 ataacggaaggtgctgnctcttaaacacaaaccattggaataaggtctttaatagcgagt 98 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 ataacggaaggtgctg-ctcttaaacacaaaccattggaataaggtctttaatagcgagt 655 Query: 99 tgttaatgaccttatatactttattcctggttggcaaatcgaagaaatcattatattctt 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 tgttaatgaccttatatactttattcctggttggcaaatcgaagaaatcattatattctt 715 Query: 159 tcaacacatcaataatagctgaaatgtaaatttcattctctgcatcggtaaattcgtcaa 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 tcaacacatcaataatagctgaaatgtaaatttcattctctgcatcggtaaattcgtcaa 775 Query: 219 tcaggtgaaagtgtgaatcgaagtaatcagcgaaagatgaaagccaatacctgttgacta 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tcaggtgaaagtgtgaatcgaagtaatcagcgaaagatgaaagccaatacctgttgacta 835 Query: 279 attcataaaacttggagtcacccactgcctccttcaagagaataacgttttgagggttaa 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 attcataaaacttggagtcacccactgcctccttcaagagaataacgttttgagggttaa 895 Query: 339 cagtcattgaaggttcccaatttttcaaaaactgctcgaactccagcaggataagtgctt 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 cagtcattgaaggttcccaatttttcaaaaactgctcgaactccagcaggataagtgctt 955 Query: 399 ttaatgactttaaatccctttctcccaaaatgagatgcaactcgccgtatgtcaccatga 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 ttaatgactttaaatccctttctcccaaaatgagatgcaactcgccgtatgtcaccatga 1015 Query: 459 attcatctgacagaaattgaggagaaagttgtatttcgagagccggcataatgtagcggg 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 attcatctgacagaaattgaggagaaagttgtatttcgagagccggcataatgtagcggg 1075 Query: 519 aaaggaagtgttccctgcagctaataaagtcaataataggtaaatactgaacggttattt 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 aaaggaagtgttccctgcagctaataaagtcaataataggtaaatactgaacggttattt 1135 Query: 579 gacgtagcatcctcgaatatccggtatttgaatctaaccaataacataangggttgatac 638 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1136 gacgtagcatcctcgaatatccggtatttgaatctaaccaataacataa-gggttgatac 1194 Query: 639 accaacctataaatgctgctttgtgtttcgttc-aaatatatccagattccattctatat 697 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1195 accaacctataaatgctgctttgtgtttcgttcaaaatatatccagattccattctatat 1254 Query: 698 g-aagaaacc-tattgctgccctccaat-gtttaactttttcaactgcatatctggcgta 754 | |||||||| ||||||||||||| ||| ||| ||||||| | ||||||||||| |||| Sbjct: 1255 gaaagaaaccttattgctgccctcaaatggttcaacttttcgacctgcatatctgccgta 1314 Query: 755 tt-atttcacca-taagctctttgagc-agaacatgttacaaagc-tatcaagtatgcca 810 || ||| ||| | |||||||||||||| |||||||| |||| ||| ||||||||||| || Sbjct: 1315 ttaattccacgattaagctctttgagcaagaacatggtacagagcttatcaagtatgtca 1374 Query: 811 tcg-catttatttttaggcattcagtaat-tgatcttcagaactgggttgcgaaagttgg 868 ||| ||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 1375 tcgtcatttatttctaggcattcagtaatctgatcttcaagacttggttgcgaaagtt-g 1433 Query: 869 ttttcccttgac-ttttctaaaaacttttgtagcctt 904 |||| ||||||| |||||||||| ||||||||||| Sbjct: 1434 tttttccttgactttttctaaaacactttgtagcctt 1470 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6760 Number of Sequences: 1807 Number of extensions: 6760 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)