BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZG10RM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1288                                                        1352   0.0  

>3x_Contig1288 
          Length = 8015

 Score = 1352 bits (682), Expect = 0.0
 Identities = 808/836 (96%), Gaps = 11/836 (1%)
 Strand = Plus / Minus

                                                                        
Query: 48   tttcctttccagttcaaatctagataagggcttgggagcaggcgcactaacagttggcgt 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2266 tttcctttccagttcaaatctagataagggcttgggagcaggcgcactaacagttggcgt 2207

                                                                        
Query: 108  accacctggtttgaagaaaccatatgatgaaagggttgactgacccttaggacgagaaag 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2206 accacctggtttgaagaaaccatatgatgaaagggttgactgacccttaggacgagaaag 2147

                                                                        
Query: 168  aagcgatgaacctatatttgccttttt-aacattgaatcagcacgctggccagaagtcat 226
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2146 aagcgatgaacctatatttgcctttttcaacattgaatcagcacgctggccagaagtcat 2087

                                                                        
Query: 227  ggatggtttattcggttgctgctgaacagtagagatggtagcttttgattcctgtaagga 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2086 ggatggtttattcggttgctgctgaacagtagagatggtagcttttgattcctgtaagga 2027

                                                                        
Query: 287  tccagaaggtttagtaccctttttcagtaatgctttttctaagtgatacttttcagattc 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2026 tccagaaggtttagtaccctttttcagtaatgctttttctaagtgatacttttcagattc 1967

                                                                        
Query: 347  tttaacaacttcgtttgtcaaggctttgttgaagtaacgggatctttcaagaagctcttg 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1966 tttaacaacttcgtttgtcaaggctttgttgaagtaacgggatctttcaagaagctcttg 1907

                                                                        
Query: 407  gctctgagccgctgaaagtttgtttggatattttcgagcttttgaagcatatcttgccat 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1906 gctctgagccgctgaaagtttgtttggatattttcgagcttttgaagcatatcttgccat 1847

                                                                        
Query: 467  atccaacactagcatttcatcaaatcgaaattgtttctccttcgcaagatcagaagctga 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1846 atccaacactagcatttcatcaaatcgaaattgtttctccttcgcaagatcagaagctga 1787

                                                                        
Query: 527  tactattaacatgacacaagaggcaagaagctgttcatcattcaacctcaaccagtaaag 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1786 tactattaacatgacacaagaggcaagaagctgttcatcattcaacctcaaccagtaaag 1727

                                                                        
Query: 587  catatttttgaatgggctcattgggaatntgaaaaagatcatc-tcagttatattttccc 645
            |||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||
Sbjct: 1726 catatttttgaatgggctcattgggaatttg-aaaagatcatcttcagttata-tttccc 1669

                                                                        
Query: 646  ttgactaaaacatncgagaactccctattagaaaccattagcatattgctaac-ctctag 704
            |||||||||||||  ||||||||||||| |||| ||||||||||||||||||| ||||||
Sbjct: 1668 ttgactaaaacatcggagaactccctataagaacccattagcatattgctaacactctag 1609

                                                                        
Query: 705  cacatctcttgtgaaatt-tctcataacacatttgaataccttgaggtccattgaatggt 763
            |||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||
Sbjct: 1608 cacatctcttgtgaaattctccaataccacatttgaataccttgaggtccattgaatggt 1549

                                                                        
Query: 764  ttctagat-aatcatattcaaaaatgtccatgaagaacgccaaaaactggaatag-tcat 821
            |||||||| |||||||| |||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 1548 ttctagataaatcatatccaaaaatgtccatgaagaacgccaaaaact-gaatagttcat 1490

                                                                    
Query: 822  catttggattctgaa-cttttaacttttacaaatcaaaaaaattaccggggactgg 876
            ||||| || |||||| |||| ||||| |  |||||| ||||| |||||| ||||||
Sbjct: 1489 cattt-gaatctgaatctttaaacttctcaaaatcagaaaaaataccggtgactgg 1435


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7522
Number of Sequences: 1807
Number of extensions: 7522
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)