BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZH02FM1.SCF screened BAC_end (1032 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig185 632 0.0 >3x_Contig185 Length = 1072 Score = 632 bits (319), Expect = 0.0 Identities = 368/382 (96%), Gaps = 2/382 (0%) Strand = Plus / Plus Query: 86 taagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactccgtg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 taagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactccgtg 156 Query: 146 cgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgagttcg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 cgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgagttcg 216 Query: 206 aactttaaaaatttttctcttagcccctgtgatccaatagcatgtagcgtgtaaactccg 265 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 aactttaaaaatttgaccattagcccctgtgatccaatagcatgtagcgtgtaaactccg 276 Query: 266 taggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaaaaca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 taggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaaaaca 336 Query: 326 gcagttgtttccagggatgttgagttacgttggatctttcgataatatncctataattct 385 |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 337 gcagttgtttccagggatgttgagttacgttgtatctttcgataatatccctataattct 396 Query: 386 cgggaagtatttcattttttttttggatcatccatttttttccttcaatgttaacgttat 445 ||| | |||||||||||||||||| |||||| ||||||||||||||| |||| ||||||| Sbjct: 397 cggtatgtatttcatttttttttt-gatcattcatttttttccttcattgtttacgttat 455 Query: 446 tttggacggaggaaaacaactg 467 ||| ||| |||||||||||||| Sbjct: 456 ttt-gactgaggaaaacaactg 476 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 27,876 Number of Sequences: 1807 Number of extensions: 27876 Number of successful extensions: 2338 Number of sequences better than 1.0e-20: 1 length of query: 1032 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1016 effective length of database: 10,329,639 effective search space: 10494913224 effective search space used: 10494913224 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)