BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZH03FM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1442 955 0.0 >3x_Contig1442 Length = 8270 Score = 955 bits (482), Expect = 0.0 Identities = 514/522 (98%), Gaps = 2/522 (0%) Strand = Plus / Minus Query: 87 cctgcgttaactcaaaaggtgttctggacaggttactatgccaaattaaaaatgaagaag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7970 cctgcgttaactcaaaaggtgttctggacaggttactatgccaaattaaaaatgaagaag 7911 Query: 147 ttccacattccaggtggtgacactctaggtaacattttgttcaagaaggtcagagaagcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7910 ttccacattccaggtggtgacactctaggtaacattttgttcaagaaggtcagagaagcc 7851 Query: 207 accggtggtcattttttatttgtgttgaacggtggttccccattgtctagagaagcacaa 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7850 accggtggtcatttaagatttgtgttgaacggtggttccccattgtctagagaagcacaa 7791 Query: 267 gagtttatcacaaacttgatttgtccaatgttgattggttatggtttgactgaaaccatg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7790 gagtttatcacaaacttgatttgtccaatgttgattggttatggtttgactgaaaccatg 7731 Query: 327 gctaacacaactatcttacaaccagaacattttgaatacggagtcgctggtgacattgtc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7730 gctaacacaactatcttacaaccagaacattttgaatacggagtcgctggtgacattgtc 7671 Query: 387 ggtagtatcactgtcaagttggtcgacgttgaagaattgggctacttcgcaaagaattct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7670 ggtagtatcactgtcaagttggtcgacgttgaagaattgggctacttcgcaaagaattct 7611 Query: 447 caaggtgaagtctggattaaaggtgaacctgtcactcgagaat-ttacaaaaacgaggaa 505 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7610 caaggtgaagtctggattaaaggtgaacctgtcactcgagaatattacaaaaacgaggaa 7551 Query: 506 gagactaagggttctatcacagatgatggctggttcaaaactggtgacattgcggaaggg 565 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 7550 gagactaagggttctatcacagatgatggctggttcaaaactggtgacattgcggaatgg 7491 Query: 566 actcccaaagggtcatttaaagattattgaccggaaaaagaa 607 ||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 7490 act-ccaaagggtcaattaaagattattgaccgtaaaaagaa 7450 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7502 Number of Sequences: 1807 Number of extensions: 7502 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)