BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZH05RM1.SCF screened BAC_end (978 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1726 1499 0.0 >3x_Contig1726 Length = 20144 Score = 1499 bits (756), Expect = 0.0 Identities = 844/865 (97%), Gaps = 8/865 (0%) Strand = Plus / Plus Query: 49 gtcgaatgtactctgaagttcat-aacttagatctgacatataaatacagaaagcagata 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 16748 gtcgaatgtactctgaagttcatcaacttagatctgacatataaatacagaaagcagata 16807 Query: 108 tacaataaaaagatgccttaaaaaggagtagagattctgcccagggataaatattgtaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16808 tacaataaaaagatgccttaaaaaggagtagagattctgcccagggataaatattgtaaa 16867 Query: 168 gtcgctgtatgaataataggtttcattgttggctgtttgaaaatagcacttcaacaaacc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16868 gtcgctgtatgaataataggtttcattgttggctgtttgaaaatagcacttcaacaaacc 16927 Query: 228 gtgttattgataatcctgtctcggcggttaaacagctgatagagaattcgatagacgcca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16928 gtgttattgataatcctgtctcggcggttaaacagctgatagagaattcgatagacgcca 16987 Query: 288 attgtactaaagtgctgatcaaaatagatgaatctagcggcggatgtaggtacatccaat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16988 attgtactaaagtgctgatcaaaatagatgaatctagcggcggatgtaggtacatccaat 17047 Query: 348 tgaatgatgatggtaacggaataagtgtccagaagcgcagcagcgtttttgttaaacact 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17048 tgaatgatgatggtaacggaataagtgtccagaagcgcagcagcgtttttgttaaacact 17107 Query: 408 tcaaaactgacggtaaatcatgcaaaagaatagggtacaaaggaagagcgttatataata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17108 tcaaaactgacggtaaatcatgcaaaagaatagggtacaaaggaagagcgttatataata 17167 Query: 468 ttggcaaaacagcatcgaagaagggatctatcgaggtgataacacggactatttcagaga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17168 ttggcaaaacagcatcgaagaagggatctatcgaggtgataacacggactatttcagaga 17227 Query: 528 atgttgctgttaaatggtcaccacctagaatcagaataaatgaaactattagattttcca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17228 atgttgctgttaaatggtcaccacctagaatcagaataaatgaaactattagattttcca 17287 Query: 588 aggtagtgaatccaccgggtacgacagttattctcagagacctaatgacgggaagtaaaa 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17288 aggtagtgaatccaccgggtacgacagttattctcagagacctaatgacgggaagtaaaa 17347 Query: 648 gcagtagactggcanagaaagat-aaaattatattanaatgattagggatatgctttttc 706 |||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 17348 gcagtagactggcaaagaaagataaaaattatattaaaatgattagggatatgctttttc 17407 Query: 707 atttttctttgattcataagcatatatgntnntagttgccagcttgtcaatcctctangg 766 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || Sbjct: 17408 atttttctttgattcataagcatatatg-ttttagttgccagcttgtcaatcctctaagg 17466 Query: 767 nacggaagtatcaagactttagaatatg-tgcgcggtttggtaaatatgaagacgggatg 825 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 17467 gacggaagtatcaagactttagaatatgttgcgcggtttggtaaatatgaagaccggatg 17526 Query: 826 tcgcaattc-aaaaacatgttaccaancaggatccttatatttgagtttcgaccactttg 884 ||||||||| |||||||||||||||| ||| || |||||| ||||| ||||| ||||||| Sbjct: 17527 tcgcaattcaaaaaacatgttaccaaacagaat-cttatagttgag-ttcgaacactttg 17584 Query: 885 atgagatttgagctaaatgaatctc 909 |||||| | ||||||| |||||||| Sbjct: 17585 atgaga-tagagctaagtgaatctc 17608 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7114 Number of Sequences: 1807 Number of extensions: 7114 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 978 length of database: 10,358,551 effective HSP length: 16 effective length of query: 962 effective length of database: 10,329,639 effective search space: 9937112718 effective search space used: 9937112718 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)