BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC45ZH05RM1.SCF screened BAC_end
         (978 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1726                                                        1499   0.0  

>3x_Contig1726 
          Length = 20144

 Score = 1499 bits (756), Expect = 0.0
 Identities = 844/865 (97%), Gaps = 8/865 (0%)
 Strand = Plus / Plus

                                                                         
Query: 49    gtcgaatgtactctgaagttcat-aacttagatctgacatataaatacagaaagcagata 107
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 16748 gtcgaatgtactctgaagttcatcaacttagatctgacatataaatacagaaagcagata 16807

                                                                         
Query: 108   tacaataaaaagatgccttaaaaaggagtagagattctgcccagggataaatattgtaaa 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16808 tacaataaaaagatgccttaaaaaggagtagagattctgcccagggataaatattgtaaa 16867

                                                                         
Query: 168   gtcgctgtatgaataataggtttcattgttggctgtttgaaaatagcacttcaacaaacc 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16868 gtcgctgtatgaataataggtttcattgttggctgtttgaaaatagcacttcaacaaacc 16927

                                                                         
Query: 228   gtgttattgataatcctgtctcggcggttaaacagctgatagagaattcgatagacgcca 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16928 gtgttattgataatcctgtctcggcggttaaacagctgatagagaattcgatagacgcca 16987

                                                                         
Query: 288   attgtactaaagtgctgatcaaaatagatgaatctagcggcggatgtaggtacatccaat 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16988 attgtactaaagtgctgatcaaaatagatgaatctagcggcggatgtaggtacatccaat 17047

                                                                         
Query: 348   tgaatgatgatggtaacggaataagtgtccagaagcgcagcagcgtttttgttaaacact 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17048 tgaatgatgatggtaacggaataagtgtccagaagcgcagcagcgtttttgttaaacact 17107

                                                                         
Query: 408   tcaaaactgacggtaaatcatgcaaaagaatagggtacaaaggaagagcgttatataata 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17108 tcaaaactgacggtaaatcatgcaaaagaatagggtacaaaggaagagcgttatataata 17167

                                                                         
Query: 468   ttggcaaaacagcatcgaagaagggatctatcgaggtgataacacggactatttcagaga 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17168 ttggcaaaacagcatcgaagaagggatctatcgaggtgataacacggactatttcagaga 17227

                                                                         
Query: 528   atgttgctgttaaatggtcaccacctagaatcagaataaatgaaactattagattttcca 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17228 atgttgctgttaaatggtcaccacctagaatcagaataaatgaaactattagattttcca 17287

                                                                         
Query: 588   aggtagtgaatccaccgggtacgacagttattctcagagacctaatgacgggaagtaaaa 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17288 aggtagtgaatccaccgggtacgacagttattctcagagacctaatgacgggaagtaaaa 17347

                                                                         
Query: 648   gcagtagactggcanagaaagat-aaaattatattanaatgattagggatatgctttttc 706
             |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 17348 gcagtagactggcaaagaaagataaaaattatattaaaatgattagggatatgctttttc 17407

                                                                         
Query: 707   atttttctttgattcataagcatatatgntnntagttgccagcttgtcaatcctctangg 766
             |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| ||
Sbjct: 17408 atttttctttgattcataagcatatatg-ttttagttgccagcttgtcaatcctctaagg 17466

                                                                         
Query: 767   nacggaagtatcaagactttagaatatg-tgcgcggtttggtaaatatgaagacgggatg 825
              ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 17467 gacggaagtatcaagactttagaatatgttgcgcggtttggtaaatatgaagaccggatg 17526

                                                                         
Query: 826   tcgcaattc-aaaaacatgttaccaancaggatccttatatttgagtttcgaccactttg 884
             ||||||||| |||||||||||||||| ||| || |||||| ||||| ||||| |||||||
Sbjct: 17527 tcgcaattcaaaaaacatgttaccaaacagaat-cttatagttgag-ttcgaacactttg 17584

                                      
Query: 885   atgagatttgagctaaatgaatctc 909
             |||||| | ||||||| ||||||||
Sbjct: 17585 atgaga-tagagctaagtgaatctc 17608


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7114
Number of Sequences: 1807
Number of extensions: 7114
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)