BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC45ZH09FM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 565 e-161 >3x_Contig1497 Length = 11582 Score = 565 bits (285), Expect = e-161 Identities = 394/421 (93%), Gaps = 7/421 (1%) Strand = Plus / Minus Query: 279 ctggtaagaaagctattcaagaattgaactatgctgaaatcaacggtagaccatgtagaa 338 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 11280 ctggtaagattgctattcaagttttgaactatgctgaaatcaacggtagaccatgtagaa 11221 Query: 339 ttatgtggtccgaacgtgacccagctatcagaaagaagggttctggtaacattttcatca 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11220 ttatgtggtccgaacgtgacccagctatcagaaagaagggttctggtaacattttcatca 11161 Query: 399 agaacttgcacccagccattgacaacaaggctttgcatgaaactttctccactttcggtg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11160 agaacttgcacccagccattgacaacaaggctttgcatgaaactttctccactttcggtg 11101 Query: 459 aagtcttgtcttgtaaagttgcttttagatgagaattggaactctagaggcttcggtttc 518 |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| Sbjct: 11100 aagtcttgtcttgtaaagttgc-tttagatgagaatggaaactctagaggcttcggtttc 11042 Query: 519 gttcattt-aaggaagaatccgatgctaaagattctattgaaacccgtc-acggtttgtt 576 |||||||| |||||||||||||||||||| ||| |||||| || ||||| ||||| |||| Sbjct: 11041 gttcatttcaaggaagaatccgatgctaaggatgctattg-aagccgtcaacggtatgtt 10983 Query: 577 gatgaacggtttggaggtttacgttgccatgcacgttcc-aagaaagaccgtattttcca 635 ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| | | | Sbjct: 10982 gatgaacggtttggaagtttacgttgccatgcacgttccaaagaaggaccgtatctccaa 10923 Query: 636 gttggaagaagcc-aggcttacttta-caacatttacgtcaaaaacatttaccttgaaac 693 ||||||||||||| ||||| |||| | ||||||||||||||| |||||| || ||||||| Sbjct: 10922 gttggaagaagccaaggctaacttcaccaacatttacgtcaagaacattgacgttgaaac 10863 Query: 694 c 694 | Sbjct: 10862 c 10862 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9840 Number of Sequences: 1807 Number of extensions: 9840 Number of successful extensions: 83 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)